RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD46-201ENST00000322875 HMG20BQ9P0W2 317 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 JRKLQ9Y4A0 524 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 SALL1Q9NSC2 1324 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 HIP1O00291 1037 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
CD46-201ENST00000322875 LONRF2Q1L5Z9 754 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 CCDC34Q96HJ3 373 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 TCEANC2Q96MN5 208 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 USP28Q96RU2 1077 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 IKBKBO14920 756 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 KINO60870 393 aaKnown RBP9.06□□□□□ -0.96
CD46-201ENST00000322875 URI1O94763 535 aaPredicted RBP9.06□□□□□ -0.96
CD46-201ENST00000322875 CORO7P57737 925 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 BRD3Q15059 726 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
CD46-201ENST00000322875 COL15A1P39059 1388 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 CTDNEP1O95476 244 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 ATP2B1P20020 1258 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 BEND6Q5SZJ8 279 aaPredicted RBP9.05□□□□□ -0.96
CD46-201ENST00000322875 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
CD46-201ENST00000322875 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 CCDC73Q6ZRK6 1079 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 SECISBP2LQ93073 1101 aaKnown RBP9.05□□□□□ -0.96
CD46-201ENST00000322875 NWD1Q149M9 1564 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 TXLNAP40222 546 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 LMAN1P49257 510 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 APOBRQ0VD83 1088 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 HSP90AB2PQ58FF8 381 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 HOMER1Q86YM7 354 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 WDR24Q96S15 920 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 ESF1Q9H501 851 aaKnown RBP9.05□□□□□ -0.96
CD46-201ENST00000322875 TECPR2O15040 1411 aa9.05□□□□□ -0.96
CD46-201ENST00000322875 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 LOC102724159A0A0B4J2E5 919 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 SMC2O95347 1197 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 GSCP56915 257 aaPredicted RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 SCRN1Q12765 414 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 PWP2Q15269 919 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 ADALQ6DHV7 355 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 MYCBPQ99417 103 aaPredicted RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 PFKFB2O60825 505 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 NLRP12P59046 1061 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 STK3Q13188 491 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 TBX2Q13207 712 aaPredicted RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 MLECQ14165 292 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 TTC31Q49AM3 519 aaPredicted RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 FSIP1Q8NA03 581 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 MSANTD4Q8NCY6 345 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 PCDHA7Q9UN72 937 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 PPP2R2CQ9Y2T4 447 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 FANCCQ00597 558 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 ANKZF1Q9H8Y5 726 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 RTEL1Q9NZ71 1219 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
CD46-201ENST00000322875 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
CD46-201ENST00000322875 IGSF1Q8N6C5 1336 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 ZSCAN12O43309 604 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 TAF5LO75529 589 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 CLASRPQ8N2M8 674 aaKnown RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 MRPS27Q92552 414 aaKnown RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 AGXT2Q9BYV1 514 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 L1RE1Q9UN81 338 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 NRDCO43847 1150 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 NDUFA8P51970 172 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
CD46-201ENST00000322875 DPF2Q92785 391 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
CD46-201ENST00000322875 UTP14AQ9BVJ6 771 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms