RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 FYCO1Q9BQS8 1478 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 USP27XA6NNY8 438 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 CREB3O43889 395 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 Q4G0T1 1027 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 TRMT1Q9NXH9 659 aaKnown RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 TUBB4BP68371 445 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 GNL2Q13823 731 aaKnown RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 POSTNQ15063 836 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 ENOX2Q16206 610 aaKnown RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 PTPRGP23470 1445 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 ZEB2O60315 1214 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 DESP17661 470 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 EIF4BP23588 611 aaKnown RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 CCT5P48643 541 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 MCM2P49736 904 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 MIS18BP1Q6P0N0 1132 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 BARX2Q9UMQ3 279 aaPredicted RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 RNF8O76064 485 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 GSDMDP57764 484 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 ZGPATQ8N5A5 531 aaKnown RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 ZNF644Q9H582 1327 aaPredicted RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 GOLGA6L7A0A1B0GV03 622 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 SLC7A5Q01650 507 aa10.63□□□□□ -0.71
BDNF-201ENST00000314915 DYNC1I2Q13409 638 aaKnown RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 NAT10Q9H0A0 1025 aaKnown RBP10.63□□□□□ -0.71
BDNF-201ENST00000314915 A6NNZ2 444 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 ZSCAN12O43309 604 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 GADD45BO75293 160 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 KCNJ6P48051 423 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 PTPRKQ15262 1439 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 MPHOSPH6Q99547 160 aaKnown RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 IQSEC3Q9UPP2 1182 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 CAMSAP2Q08AD1 1489 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 MYO1FO00160 1098 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 STIP1P31948 543 aaKnown RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 ATP11CQ8NB49 1132 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 USP26Q9BXU7 913 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 FAM204AQ9H8W3 233 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 RABL2BQ9UNT1 228 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 U2AF1L5P0DN76 240 aaPredicted RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 U2AF1Q01081 240 aaKnown RBP eCLIP10.62□□□□□ -0.71
BDNF-201ENST00000314915 TMEM110Q86TL2 294 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 MTRQ99707 1265 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 ITGB1BP2Q9UKP3 347 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 WDR33Q9C0J8 1336 aaKnown RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 MAP3K5Q99683 1374 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 TUBBP07437 444 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 SF3B2Q13435 895 aaKnown RBP10.62□□□□□ -0.71
BDNF-201ENST00000314915 CCDC40Q4G0X9 1142 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 TMC6Q7Z403 805 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 FAM76AQ8TAV0 307 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 PLEKHA4Q9H4M7 779 aa10.62□□□□□ -0.71
BDNF-201ENST00000314915 MYO1BO43795 1136 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 CAPN15O75808 1086 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 ETF1P62495 437 aaKnown RBP10.61□□□□□ -0.71
BDNF-201ENST00000314915 YIPF3Q9GZM5 350 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 CENPHQ9H3R5 247 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
BDNF-201ENST00000314915 CUX1P39880 1505 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 HECW1Q76N89 1606 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 LONRF3Q496Y0 759 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 GALNT15Q8N3T1 639 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 HOOK1Q9UJC3 728 aaKnown RBP10.61□□□□□ -0.71
BDNF-201ENST00000314915 FBLN2P98095 1184 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 ACTN3Q08043 901 aaPredicted RBP10.61□□□□□ -0.71
BDNF-201ENST00000314915 KIF4BQ2VIQ3 1234 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 GIMAP6Q6P9H5 292 aa10.61□□□□□ -0.71
BDNF-201ENST00000314915 YTHDF3Q7Z739 585 aaKnown RBP10.61□□□□□ -0.71
BDNF-201ENST00000314915 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.71
BDNF-201ENST00000314915 ZNF394Q53GI3 561 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 GOLGA1Q92805 767 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 CARD6Q9BX69 1037 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 CC2D2AQ9P2K1 1620 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms