RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 ENC1O14682 589 aa12.38□□□□□ -0.43
GGA2-201ENST00000309859 N4BP3O15049 544 aa12.38□□□□□ -0.43
GGA2-201ENST00000309859 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
GGA2-201ENST00000309859 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
GGA2-201ENST00000309859 RXRAP19793 462 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 MCM3P25205 808 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 MAP2K1Q02750 393 aaPredicted RBP12.37□□□□□ -0.43
GGA2-201ENST00000309859 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
GGA2-201ENST00000309859 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
GGA2-201ENST00000309859 RGS12O14924 1447 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 SPTLC2O15270 562 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 IFFO1Q0D2I5 559 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 E7EVH7 732 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 SGSM2O43147 1006 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 MYL5Q02045 173 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 BRD3Q15059 726 aa12.37□□□□□ -0.43
GGA2-201ENST00000309859 FYB1O15117 783 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 PNOCQ13519 176 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 IMPACTQ9P2X3 320 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 KRT32Q14532 448 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 FAM170AA1A519 330 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 IFT88Q13099 833 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 CASP8Q14790 479 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 ZNF827Q17R98 1081 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 TANGO6Q9C0B7 1094 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
GGA2-201ENST00000309859 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
GGA2-201ENST00000309859 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 RIN2Q8WYP3 895 aaPredicted RBP12.36□□□□□ -0.43
GGA2-201ENST00000309859 FAM169AQ9Y6X4 670 aa12.36□□□□□ -0.43
GGA2-201ENST00000309859 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 SLFNL1Q499Z3 407 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
GGA2-201ENST00000309859 A2MP01023 1474 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 FAM71BQ8TC56 605 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 ARHGAP6O43182 974 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
GGA2-201ENST00000309859 MYL6BP14649 208 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 NESP48681 1621 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 YEATS4O95619 227 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 CPLX4Q7Z7G2 160 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
GGA2-201ENST00000309859 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
GGA2-201ENST00000309859 IRAK4Q9NWZ3 460 aa12.35□□□□□ -0.43
GGA2-201ENST00000309859 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 E4F1Q66K89 784 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 SLC27A2O14975 620 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 TUBB4AP04350 444 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA2-201ENST00000309859 NDUFA8P51970 172 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 SPA17Q15506 151 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 FOXO3O43524 673 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 OPA1O60313 960 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CCZ1BP86790 482 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 NEDD9Q14511 834 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 B4GALNT4Q76KP1 1039 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 WDR24Q96S15 920 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 PTPRCP08575 1304 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 ZPR1O75312 459 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 ZNF202O95125 648 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
GGA2-201ENST00000309859 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 CD248Q9HCU0 757 aa12.34□□□□□ -0.43
GGA2-201ENST00000309859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA2-201ENST00000309859 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.43
GGA2-201ENST00000309859 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.43
GGA2-201ENST00000309859 PAFAH1B1P43034 410 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 KSR1Q8IVT5 923 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 H3BQF6 201 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 PGBD1Q96JS3 809 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms