RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PHKA1P46020 1223 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 KCNJ4P48050 445 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 PTH1RQ03431 593 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 NLGN1Q8N2Q7 840 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 MAP4K1Q92918 833 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 ANTXR1Q9H6X2 564 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 MINPP1Q9UNW1 487 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 COL4A1P02462 1669 aa18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 RNF113AO15541 343 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 UBE4AQ14139 1066 aa18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■□□□□ 10.1
HERPUD1-201ENST00000300302 ANKRD2Q9GZV1 360 aa18.89■□□□□ 0.61
HERPUD1-201ENST00000300302 TAF1P21675 1872 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 POLRMTO00411 1230 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 NEK4P51957 841 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 ZMYM1Q5SVZ6 1142 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 ZNF589Q86UQ0 364 aaPredicted RBP18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
HERPUD1-201ENST00000300302 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 CD2BP2O95400 341 aaKnown RBP18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 RPGRQ92834 1020 aaKnown RBP18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
HERPUD1-201ENST00000300302 SNAP23O00161 211 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 MCM2P49736 904 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 DDR1Q08345 913 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 GRAPQ13588 217 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 NECTIN1Q15223 517 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 PI16Q6UXB8 463 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 GRAPLQ8TC17 118 aaPredicted RBP18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 HSP90AA1P07900 732 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 CAVIN4Q5BKX8 364 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 PRPF40BQ6NWY9 871 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 KCNB2Q92953 911 aa18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 SLKQ9H2G2 1235 aaPredicted RBP18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-201ENST00000300302 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
HERPUD1-201ENST00000300302 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
HERPUD1-201ENST00000300302 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
HERPUD1-201ENST00000300302 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
HERPUD1-201ENST00000300302 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
HERPUD1-201ENST00000300302 BCAMP50895 628 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 CHGBP05060 677 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 RASGRF1Q13972 1273 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
HERPUD1-201ENST00000300302 MYH7P12883 1935 aa18.83■□□□□ 0.61
HERPUD1-201ENST00000300302 WASHC4Q2M389 1173 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 CCDC129Q6ZRS4 1044 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 VPS37DQ86XT2 251 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 APPBP2Q92624 585 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 MAST3O60307 1309 aa18.83■□□□□ 0.6
HERPUD1-201ENST00000300302 DSCC1Q9BVC3 393 aa18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 ZNF804BA4D1E1 1349 aa18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 SLC27A2O14975 620 aa18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 IDH1O75874 414 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 SLC9C2Q5TAH2 1124 aa18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 UPF3BQ9BZI7 483 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 PIH1D3Q9NQM4 214 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-201ENST00000300302 ADD2P35612 726 aa18.81■□□□□ 0.6
HERPUD1-201ENST00000300302 MAP3K12Q12852 859 aa18.81■□□□□ 0.6
HERPUD1-201ENST00000300302 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
HERPUD1-201ENST00000300302 KLRG2A4D1S0 409 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 PSMA5P28066 241 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 GYG1P46976 350 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 UBE3CQ15386 1083 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 OSBP2Q969R2 916 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 PDGFDQ9GZP0 370 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 M0R2C6 588 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 HOXA10P31260 410 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 KRT32Q14532 448 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 TSGA10IPQ3SY00 556 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 UPF1Q92900 1129 aaKnown RBP eCLIP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 JAKMIP1Q96N16 626 aaKnown RBP18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
HERPUD1-201ENST00000300302 NRXN2Q9P2S2 1712 aa18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 SEMA3EO15041 775 aa18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 BBOX1O75936 387 aa18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 CYP46A1Q9Y6A2 500 aa18.79■□□□□ 0.6
HERPUD1-201ENST00000300302 MMP10P09238 476 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms