RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
COPS2-201ENST00000299259 RGS17Q9UGC6 210 aaPredicted RBP12.63□□□□□ -0.39
COPS2-201ENST00000299259 CHGBP05060 677 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 ZFYP08048 801 aaPredicted RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 MCM2P49736 904 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
COPS2-201ENST00000299259 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
COPS2-201ENST00000299259 MAST3O60307 1309 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 SNAP23O00161 211 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
COPS2-201ENST00000299259 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
COPS2-201ENST00000299259 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 KCNB2Q92953 911 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.39
COPS2-201ENST00000299259 TFCP2L1Q9NZI6 479 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
COPS2-201ENST00000299259 ST5P78524 1137 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 HMG20BQ9P0W2 317 aa12.61□□□□□ -0.39
COPS2-201ENST00000299259 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
COPS2-201ENST00000299259 SLC27A2O14975 620 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 RASGRF1Q13972 1273 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 NBR1Q14596 966 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 CHMP5Q9NZZ3 219 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
COPS2-201ENST00000299259 CHD4Q14839 1912 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 SERPINB2P05120 415 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 CYP2E1P05181 493 aaPredicted RBP12.59□□□□□ -0.39
COPS2-201ENST00000299259 DDIT3P35638 169 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 SPATA5Q8NB90 893 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 APPBP2Q92624 585 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
COPS2-201ENST00000299259 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
COPS2-201ENST00000299259 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
COPS2-201ENST00000299259 TM4SF1P30408 202 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 DDR1Q08345 913 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 TM6SF1Q9BZW5 370 aa12.59□□□□□ -0.39
COPS2-201ENST00000299259 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
COPS2-201ENST00000299259 ZNF804BA4D1E1 1349 aa12.58□□□□□ -0.39
COPS2-201ENST00000299259 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.39
COPS2-201ENST00000299259 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 M0R2C6 588 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 FLAD1Q8NFF5 587 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
COPS2-201ENST00000299259 DSCC1Q9BVC3 393 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
COPS2-201ENST00000299259 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
COPS2-201ENST00000299259 POLRMTO00411 1230 aaKnown RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 IDH1O75874 414 aaKnown RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 ADD2P35612 726 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 BCAMP50895 628 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 GRAPQ13588 217 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 TTC14Q96N46 770 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 PSMA5P28066 241 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 CRY2Q49AN0 593 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 NOL8Q76FK4 1167 aaKnown RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
COPS2-201ENST00000299259 CYP46A1Q9Y6A2 500 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
COPS2-201ENST00000299259 KRT32Q14532 448 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
COPS2-201ENST00000299259 HSPD1P10809 573 aaKnown RBP12.55□□□□□ -0.4
COPS2-201ENST00000299259 PDE6AP16499 860 aa12.55□□□□□ -0.4
COPS2-201ENST00000299259 GYG1P46976 350 aa12.55□□□□□ -0.4
COPS2-201ENST00000299259 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
COPS2-201ENST00000299259 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
COPS2-201ENST00000299259 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms