RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
FOXN4-201ENST00000299162 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
FOXN4-201ENST00000299162 SASS6Q6UVJ0 657 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
FOXN4-201ENST00000299162 FTOQ9C0B1 505 aaKnown RBP eCLIP11.92□□□□□ -0.5
FOXN4-201ENST00000299162 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
FOXN4-201ENST00000299162 RXRAP19793 462 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 OTUD7BQ6GQQ9 843 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
FOXN4-201ENST00000299162 USP25Q9UHP3 1055 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 HSPD1P10809 573 aaKnown RBP11.92□□□□□ -0.5
FOXN4-201ENST00000299162 ATP2B3Q16720 1220 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 CCDC39Q9UFE4 941 aa11.92□□□□□ -0.5
FOXN4-201ENST00000299162 DCCP43146 1447 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 ATP6V1DQ9Y5K8 247 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 MAST3O60307 1309 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 DYNC1I1O14576 645 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
FOXN4-201ENST00000299162 BICD2Q8TD16 824 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
FOXN4-201ENST00000299162 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
FOXN4-201ENST00000299162 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
FOXN4-201ENST00000299162 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 SPC24Q8NBT2 197 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 TM6SF1Q9BZW5 370 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 PUS7LQ9H0K6 701 aaKnown RBP11.9□□□□□ -0.5
FOXN4-201ENST00000299162 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
FOXN4-201ENST00000299162 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 INCENPQ9NQS7 918 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
FOXN4-201ENST00000299162 KCNQ2O43526 872 aa11.9□□□□□ -0.51
FOXN4-201ENST00000299162 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.51
FOXN4-201ENST00000299162 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
FOXN4-201ENST00000299162 A0A087WWV3 80 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 SCRN1Q12765 414 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 ANKRD1Q15327 319 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 DDB1Q16531 1140 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
FOXN4-201ENST00000299162 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 ANKRD18BA2A2Z9 1011 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 E7EWF7 191 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 LIG1P18858 919 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 KRT85P78386 507 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
FOXN4-201ENST00000299162 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
FOXN4-201ENST00000299162 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
FOXN4-201ENST00000299162 PHKA1P46020 1223 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 UBE2HP62256 183 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 HMG20BQ9P0W2 317 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 COL18A1P39060 1754 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 KRT32Q14532 448 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 MPHOSPH8Q99549 860 aa11.88□□□□□ -0.51
FOXN4-201ENST00000299162 CGNQ9P2M7 1197 aaKnown RBP11.88□□□□□ -0.51
FOXN4-201ENST00000299162 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 WTIPA6NIX2 430 aaPredicted RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 MCAMP43121 646 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 CCDC183Q5T5S1 534 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 CCDC82Q8N4S0 544 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 RGS22Q8NE09 1264 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 EPB41L2O43491 1005 aaKnown RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 CTSWP56202 376 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 ZMYM1Q5SVZ6 1142 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 KCNG1Q9UIX4 513 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 PTPDC1A2A3K4 754 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 PHF14O94880 888 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 FGAP02671 866 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 GTF3C6Q969F1 213 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
FOXN4-201ENST00000299162 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
FOXN4-201ENST00000299162 NPHP1O15259 732 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 GPAA1O43292 621 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 PDCP20941 246 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 SLC4A8Q2Y0W8 1093 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
FOXN4-201ENST00000299162 LMTK3Q96Q04 1460 aa11.86□□□□□ -0.51
FOXN4-201ENST00000299162 SIPA1L3O60292 1781 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms