RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
PREX2-201ENST00000288368 KRT2P35908 639 aa12.56□□□□□ -0.4
PREX2-201ENST00000288368 C6orf50Q9HD87 102 aa12.56□□□□□ -0.4
PREX2-201ENST00000288368 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
PREX2-201ENST00000288368 Q6ZUG5 572 aa12.56□□□□□ -0.4
PREX2-201ENST00000288368 ZSCAN22P10073 491 aaPredicted RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 NUCB1Q02818 461 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 CCDC6Q16204 474 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 ANAPC4Q9UJX5 808 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 MAK16Q9BXY0 300 aaKnown RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
PREX2-201ENST00000288368 SYT1P21579 422 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 AKNAD1Q5T1N1 836 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 SH3BP5O60239 455 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 OGFOD1Q8N543 542 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 CCDC160A6NGH7 325 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 CCDC14Q49A88 953 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 SELENOSQ9BQE4 189 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
PREX2-201ENST00000288368 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 CYLC1P35663 651 aaPredicted RBP12.54□□□□□ -0.4
PREX2-201ENST00000288368 FBF1Q8TES7 1133 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 NPATQ14207 1427 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 MCM7P33993 719 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
PREX2-201ENST00000288368 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 ZBTB16Q05516 673 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 SMIM23A6NLE4 172 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 DENND4BO75064 1496 aaPredicted RBP12.54□□□□□ -0.4
PREX2-201ENST00000288368 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
PREX2-201ENST00000288368 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 TAF12Q16514 161 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
PREX2-201ENST00000288368 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
PREX2-201ENST00000288368 ATP2A1O14983 1001 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 TRPM2O94759 1503 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 DYNC1I1O14576 645 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 CCDC129Q6ZRS4 1044 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 BICDL2A1A5D9 508 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 SNX16P57768 344 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
PREX2-201ENST00000288368 NAP1L3Q99457 506 aaPredicted RBP12.53□□□□□ -0.4
PREX2-201ENST00000288368 ARFGAP3Q9NP61 516 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 ZHX1Q9UKY1 873 aaPredicted RBP12.53□□□□□ -0.4
PREX2-201ENST00000288368 B4DLN1 442 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 CRCPO75575 148 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 MRPL12P52815 198 aaKnown RBP12.53□□□□□ -0.4
PREX2-201ENST00000288368 PSMA7O14818 248 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
PREX2-201ENST00000288368 MNAT1P51948 309 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 NEK11Q8NG66 645 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 C8orf37Q96NL8 207 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.4
PREX2-201ENST00000288368 PPP1R7Q15435 360 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 TTC14Q96N46 770 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 NDC80O14777 642 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 CFAP157Q5JU67 520 aa12.52□□□□□ -0.4
PREX2-201ENST00000288368 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 SKILP12757 684 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 MCM6Q14566 821 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.41
PREX2-201ENST00000288368 TNNI2P48788 182 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 TACC1O75410 805 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 ZFYP08048 801 aaPredicted RBP12.52□□□□□ -0.41
PREX2-201ENST00000288368 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 GOLGA1Q92805 767 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 SMC1BQ8NDV3 1235 aa12.52□□□□□ -0.41
PREX2-201ENST00000288368 MCMDC2Q4G0Z9 681 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
PREX2-201ENST00000288368 LMBR1Q8WVP7 490 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.51□□□□□ -0.41
PREX2-201ENST00000288368 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 KRT222Q8N1A0 295 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 RPRD2Q5VT52 1461 aaKnown RBP12.51□□□□□ -0.41
PREX2-201ENST00000288368 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 GAS8O95995 478 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 KRT5P13647 590 aa12.51□□□□□ -0.41
PREX2-201ENST00000288368 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms