RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 AKAP2Q9Y2D5 859 aa14.19□□□□□ -0.14
SSRP1-201ENST00000278412 MROH5Q6ZUA9 1318 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
SSRP1-201ENST00000278412 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
SSRP1-201ENST00000278412 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
SSRP1-201ENST00000278412 WWC3Q9ULE0 1092 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 RTL9Q8NET4 1388 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 A0A1B0GUL6 1792 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 REC8O95072 547 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 SLC15A2Q16348 729 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 BSDC1Q9NW68 430 aaPredicted RBP14.18□□□□□ -0.14
SSRP1-201ENST00000278412 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
SSRP1-201ENST00000278412 LPIN2Q92539 896 aa14.17□□□□□ -0.14
SSRP1-201ENST00000278412 HMG20BQ9P0W2 317 aa14.17□□□□□ -0.14
SSRP1-201ENST00000278412 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
SSRP1-201ENST00000278412 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
SSRP1-201ENST00000278412 M0R2C6 588 aa14.16□□□□□ -0.14
SSRP1-201ENST00000278412 COL1A1P02452 1464 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-201ENST00000278412 OSBP2Q969R2 916 aa14.16□□□□□ -0.14
SSRP1-201ENST00000278412 ADCK5Q3MIX3 580 aa14.15□□□□□ -0.14
SSRP1-201ENST00000278412 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
SSRP1-201ENST00000278412 RAD50Q92878 1312 aa14.15□□□□□ -0.14
SSRP1-201ENST00000278412 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
SSRP1-201ENST00000278412 SLC5A1P13866 664 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 PUS7LQ9H0K6 701 aaKnown RBP14.14□□□□□ -0.15
SSRP1-201ENST00000278412 MED23Q9ULK4 1368 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 RGL2O15211 777 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
SSRP1-201ENST00000278412 MAST3O60307 1309 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 ST5P78524 1137 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 RPGRQ92834 1020 aaKnown RBP14.14□□□□□ -0.15
SSRP1-201ENST00000278412 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
SSRP1-201ENST00000278412 FAM84BQ96KN1 310 aaPredicted RBP14.14□□□□□ -0.15
SSRP1-201ENST00000278412 FOXP2O15409 715 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 CHRNA5P30532 468 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 GRAPQ13588 217 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 SPATA5Q8NB90 893 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 GRAPLQ8TC17 118 aaPredicted RBP14.13□□□□□ -0.15
SSRP1-201ENST00000278412 RBM8AQ9Y5S9 174 aaKnown RBP14.13□□□□□ -0.15
SSRP1-201ENST00000278412 SNX14Q9Y5W7 946 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 HSPA4P34932 840 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 GPSM2P81274 684 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 TTLL5Q6EMB2 1281 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 ANKIB1Q9P2G1 1089 aa14.13□□□□□ -0.15
SSRP1-201ENST00000278412 ARID4AP29374 1257 aaPredicted RBP14.12□□□□□ -0.15
SSRP1-201ENST00000278412 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
SSRP1-201ENST00000278412 HSP90B1P14625 803 aaKnown RBP14.12□□□□□ -0.15
SSRP1-201ENST00000278412 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
SSRP1-201ENST00000278412 ARAP2Q8WZ64 1704 aa14.12□□□□□ -0.15
SSRP1-201ENST00000278412 STK32BQ9NY57 414 aa14.12□□□□□ -0.15
SSRP1-201ENST00000278412 NSFL1CQ9UNZ2 370 aaKnown RBP14.12□□□□□ -0.15
SSRP1-201ENST00000278412 COL11A2P13942 1736 aaPredicted RBP14.11□□□□□ -0.15
SSRP1-201ENST00000278412 NEK4P51957 841 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 CACNA1SQ13698 1873 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 RNF113AO15541 343 aaKnown RBP14.11□□□□□ -0.15
SSRP1-201ENST00000278412 KCNJ4P48050 445 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
SSRP1-201ENST00000278412 ZMYM1Q5SVZ6 1142 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 SLC9C2Q5TAH2 1124 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 ADGRA1Q86SQ6 560 aa14.11□□□□□ -0.15
SSRP1-201ENST00000278412 BAG6P46379 1132 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 ABCF2Q9UG63 623 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 ZNF804BA4D1E1 1349 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 GRIK5Q16478 980 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 NKX2-3Q8TAU0 364 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 ZNF384Q8TF68 577 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
SSRP1-201ENST00000278412 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 ZBTB7AO95365 584 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 SRGNP10124 158 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
SSRP1-201ENST00000278412 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 MCMDC2Q4G0Z9 681 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 RUFY2Q8WXA3 655 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 MAP4K1Q92918 833 aa14.1□□□□□ -0.15
SSRP1-201ENST00000278412 ZNF532Q9HCE3 1301 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 IRS2Q9Y4H2 1338 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 CREB3L3Q68CJ9 461 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 MAGEB6Q8N7X4 407 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.09□□□□□ -0.15
SSRP1-201ENST00000278412 DENND2AQ9ULE3 1009 aa14.09□□□□□ -0.15
SSRP1-201ENST00000278412 MYH7P12883 1935 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 SLC27A2O14975 620 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 PDE6AP16499 860 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 HAND2P61296 217 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 VPS37DQ86XT2 251 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 ZNF622Q969S3 477 aaKnown RBP eCLIP14.08□□□□□ -0.169e-9■■□□□ 11.4
SSRP1-201ENST00000278412 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
SSRP1-201ENST00000278412 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 UBE4AQ14139 1066 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 HSCBQ8IWL3 235 aa14.08□□□□□ -0.16
SSRP1-201ENST00000278412 TCRBV5S4A2TA0A5A2 114 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms