RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
VPS26A-201ENST00000263559 CCDC24Q8N4L8 307 aa18.96■□□□□ 0.63
VPS26A-201ENST00000263559 TM6SF1Q9BZW5 370 aa18.96■□□□□ 0.63
VPS26A-201ENST00000263559 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
VPS26A-201ENST00000263559 MYH7P12883 1935 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.95■□□□□ 0.62
VPS26A-201ENST00000263559 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
VPS26A-201ENST00000263559 RNF20Q5VTR2 975 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 RAB3GAP1Q15042 981 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 NLRP3Q96P20 1036 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 TAF6LQ9Y6J9 622 aa18.95■□□□□ 0.62
VPS26A-201ENST00000263559 MAST3O60307 1309 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 CYP2E1P05181 493 aaPredicted RBP18.94■□□□□ 0.62
VPS26A-201ENST00000263559 ADRA2BP18089 450 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 AK2P54819 239 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 CUL4AQ13619 759 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 MYO5AQ9Y4I1 1855 aaKnown RBP18.94■□□□□ 0.62
VPS26A-201ENST00000263559 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 LRRFIP1Q32MZ4 808 aaKnown RBP18.94■□□□□ 0.62
VPS26A-201ENST00000263559 OSBP2Q969R2 916 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
VPS26A-201ENST00000263559 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
VPS26A-201ENST00000263559 M0R2C6 588 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 VPS53Q5VIR6 699 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 BSDC1Q9NW68 430 aaPredicted RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 ZFYP08048 801 aaPredicted RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 NFIXQ14938 502 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 TSGA10IPQ3SY00 556 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 RUFY3Q7L099 469 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 PROM2Q8N271 834 aa18.93■□□□□ 0.62
VPS26A-201ENST00000263559 TNPO1Q92973 898 aaKnown RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
VPS26A-201ENST00000263559 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
VPS26A-201ENST00000263559 A0A1B0GUL6 1792 aa18.92■□□□□ 0.62
VPS26A-201ENST00000263559 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
VPS26A-201ENST00000263559 LARP6Q9BRS8 491 aaKnown RBP18.92■□□□□ 0.62
VPS26A-201ENST00000263559 PSMA5P28066 241 aa18.91■□□□□ 0.62
VPS26A-201ENST00000263559 TTF1Q15361 905 aaPredicted RBP18.91■□□□□ 0.62
VPS26A-201ENST00000263559 TXNRD1Q16881 649 aa18.91■□□□□ 0.62
VPS26A-201ENST00000263559 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
VPS26A-201ENST00000263559 DSCC1Q9BVC3 393 aa18.91■□□□□ 0.62
VPS26A-201ENST00000263559 PIH1D3Q9NQM4 214 aaKnown RBP18.91■□□□□ 0.62
VPS26A-201ENST00000263559 HSPD1P10809 573 aaKnown RBP18.91■□□□□ 0.62
VPS26A-201ENST00000263559 CARMIL3Q8ND23 1372 aa18.91■□□□□ 0.62
VPS26A-201ENST00000263559 NPHP1O15259 732 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 BCAMP50895 628 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 MINPP1Q9UNW1 487 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 CYP21A2P08686 494 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 MCM4P33991 863 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 SPATA5Q8NB90 893 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 INTS4Q96HW7 963 aaKnown RBP18.9■□□□□ 0.62
VPS26A-201ENST00000263559 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.9■□□□□ 0.623e-6■□□□□ 9
VPS26A-201ENST00000263559 LIMCH1Q9UPQ0 1083 aa18.9■□□□□ 0.62
VPS26A-201ENST00000263559 GYS1P13807 737 aa18.89■□□□□ 0.62
VPS26A-201ENST00000263559 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.62
VPS26A-201ENST00000263559 RASGRF1Q13972 1273 aa18.89■□□□□ 0.62
VPS26A-201ENST00000263559 APPBP2Q92624 585 aa18.89■□□□□ 0.62
VPS26A-201ENST00000263559 PUS7LQ9H0K6 701 aaKnown RBP18.89■□□□□ 0.62
VPS26A-201ENST00000263559 WTIPA6NIX2 430 aaPredicted RBP18.89■□□□□ 0.61
VPS26A-201ENST00000263559 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
VPS26A-201ENST00000263559 TM4SF1P30408 202 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 ADD2P35612 726 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 IDH1O75874 414 aaKnown RBP18.88■□□□□ 0.61
VPS26A-201ENST00000263559 NUCB2P80303 420 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 PKP1Q13835 747 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
VPS26A-201ENST00000263559 KRT32Q14532 448 aa18.87■□□□□ 0.61
VPS26A-201ENST00000263559 RPS6KB1P23443 525 aa18.87■□□□□ 0.61
VPS26A-201ENST00000263559 RXRBP28702 533 aa18.87■□□□□ 0.61
VPS26A-201ENST00000263559 UBE4AQ14139 1066 aa18.87■□□□□ 0.61
VPS26A-201ENST00000263559 CNBD1Q8NA66 436 aa18.87■□□□□ 0.61
VPS26A-201ENST00000263559 TCEANC2Q96MN5 208 aa18.86■□□□□ 0.61
VPS26A-201ENST00000263559 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
VPS26A-201ENST00000263559 FOXP2O15409 715 aa18.86■□□□□ 0.61
VPS26A-201ENST00000263559 LARGE1O95461 756 aa18.86■□□□□ 0.61
VPS26A-201ENST00000263559 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
VPS26A-201ENST00000263559 DOCK2Q92608 1830 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 A0A0G2JLW4 131 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 PLSCR1O15162 318 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 APBA3O96018 575 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 GYG1P46976 350 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 GPAA1O43292 621 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 PDE6AP16499 860 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 STOX1Q6ZVD7 989 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 ZNF532Q9HCE3 1301 aa18.85■□□□□ 0.61
VPS26A-201ENST00000263559 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-201ENST00000263559 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
VPS26A-201ENST00000263559 TCRBV5S4A2TA0A5A2 114 aa18.84■□□□□ 0.61
VPS26A-201ENST00000263559 TTLL5Q6EMB2 1281 aa18.84■□□□□ 0.61
VPS26A-201ENST00000263559 ZSCAN31Q96LW9 406 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-201ENST00000263559 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms