RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 PKP1Q13835 747 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 HSP90AB4PQ58FF6 505 aa11.25□□□□□ -0.61
DHX40-201ENST00000251241 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
DHX40-201ENST00000251241 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
DHX40-201ENST00000251241 KDM4AO75164 1064 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 PAX7P23759 505 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 GPS2Q13227 327 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
DHX40-201ENST00000251241 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
DHX40-201ENST00000251241 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
DHX40-201ENST00000251241 MYD88Q99836 296 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 AACSQ86V21 672 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 CNTROBQ8N137 903 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
DHX40-201ENST00000251241 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
DHX40-201ENST00000251241 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
DHX40-201ENST00000251241 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 COPS6Q7L5N1 327 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 XAGE3Q8WTP9 111 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 CENPHQ9H3R5 247 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 AP1G2O75843 785 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 CYP2C19P33261 490 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 MNS1Q8NEH6 495 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
DHX40-201ENST00000251241 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
DHX40-201ENST00000251241 IBTKQ9P2D0 1353 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 DTNBO60941 627 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 HOXB7P09629 217 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 CHMLP26374 656 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 HCLS1P14317 486 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 SNX1Q13596 522 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 ANKRD7Q92527 254 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 TTC36A6NLP5 189 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 TMEM132AQ24JP5 1023 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
DHX40-201ENST00000251241 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
DHX40-201ENST00000251241 GRM8O00222 908 aa11.21□□□□□ -0.61
DHX40-201ENST00000251241 NUCB2P80303 420 aa11.21□□□□□ -0.61
DHX40-201ENST00000251241 NBPF9Q3BBW0 867 aa11.21□□□□□ -0.61
DHX40-201ENST00000251241 PAIP2Q9BPZ3 127 aaKnown RBP11.21□□□□□ -0.61
DHX40-201ENST00000251241 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.62
DHX40-201ENST00000251241 PPP1R12AO14974 1030 aaPredicted RBP11.21□□□□□ -0.62
DHX40-201ENST00000251241 LRMPQ12912 555 aa11.21□□□□□ -0.62
DHX40-201ENST00000251241 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.62
DHX40-201ENST00000251241 NUCKS1Q9H1E3 243 aaKnown RBP11.21□□□□□ -0.62
DHX40-201ENST00000251241 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.62
DHX40-201ENST00000251241 MORC2Q9Y6X9 1032 aaPredicted RBP11.21□□□□□ -0.62
DHX40-201ENST00000251241 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
DHX40-201ENST00000251241 CCDC189A1A4V9 331 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 RXRBP28702 533 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 LEKR1Q6ZMV7 388 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 CEP120Q8N960 986 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 PDLIM2Q96JY6 352 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 BICC1Q9H694 974 aaKnown RBP11.2□□□□□ -0.62
DHX40-201ENST00000251241 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 PHACTR2O75167 634 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
DHX40-201ENST00000251241 AP1ARQ63HQ0 302 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 FOXR1Q6PIV2 292 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 SUCLG2Q96I99 432 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 BOLA2Q9H3K6 86 aa11.2□□□□□ -0.62
DHX40-201ENST00000251241 TPM1P09493 284 aa11.19□□□□□ -0.62
DHX40-201ENST00000251241 PTGS1P23219 599 aa11.19□□□□□ -0.62
DHX40-201ENST00000251241 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms