RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 LRMPQ12912 555 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 ELF2Q15723 593 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
SOX9-201ENST00000245479 ANO10Q9NW15 660 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
SOX9-201ENST00000245479 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 PHKG2P15735 406 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 METTL22Q9BUU2 404 aaPredicted RBP13.38□□□□□ -0.27
SOX9-201ENST00000245479 DEPDC5O75140 1603 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 EIF3JO75822 258 aaKnown RBP13.38□□□□□ -0.27
SOX9-201ENST00000245479 ZSCAN20P17040 1043 aaPredicted RBP13.38□□□□□ -0.27
SOX9-201ENST00000245479 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 TMC6Q7Z403 805 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 TXLNBQ8N3L3 684 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 MPHOSPH8Q99549 860 aa13.38□□□□□ -0.27
SOX9-201ENST00000245479 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
SOX9-201ENST00000245479 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 MED14O60244 1454 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 ADCY9O60503 1353 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 HIP1O00291 1037 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 MCMDC2Q4G0Z9 681 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 RASSF8Q8NHQ8 419 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 NR1I2O75469 434 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 DDIT3P35638 169 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
SOX9-201ENST00000245479 SLC9C2Q5TAH2 1124 aa13.37□□□□□ -0.27
SOX9-201ENST00000245479 CCDC69A6NI79 296 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 ERLIN1O75477 346 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 CYP21A2P08686 494 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 GSDMDP57764 484 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
SOX9-201ENST00000245479 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 GTF2A1P52655 376 aaPredicted RBP13.36□□□□□ -0.27
SOX9-201ENST00000245479 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
SOX9-201ENST00000245479 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
SOX9-201ENST00000245479 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 PHKBQ93100 1093 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
SOX9-201ENST00000245479 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 ZAP70P43403 619 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
SOX9-201ENST00000245479 CCDC191Q8NCU4 936 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 CCDC70Q6NSX1 233 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 ZSWIM4Q9H7M6 989 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
SOX9-201ENST00000245479 RPS6KB1P23443 525 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 STX1AQ16623 288 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 ERBB3P21860 1342 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
SOX9-201ENST00000245479 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
SOX9-201ENST00000245479 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 AIFM3Q96NN9 605 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
SOX9-201ENST00000245479 PRDM1O75626 825 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 TDO2P48775 406 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 POLA2Q14181 598 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 C8orf76Q96K31 380 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 RGS12O14924 1447 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 ZNF213O14771 459 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 CAVIN2O95810 425 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 CPLX2Q6PUV4 134 aaKnown RBP13.34□□□□□ -0.27
SOX9-201ENST00000245479 TMEM131LA2VDJ0 1609 aa13.34□□□□□ -0.27
SOX9-201ENST00000245479 DCAF5Q96JK2 942 aa13.33□□□□□ -0.27
SOX9-201ENST00000245479 RAI14Q9P0K7 980 aa13.33□□□□□ -0.27
SOX9-201ENST00000245479 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 ZBTB22O15209 634 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 TRIM29Q14134 588 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
SOX9-201ENST00000245479 RUFY1Q96T51 708 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 ARFGAP3Q9NP61 516 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
SOX9-201ENST00000245479 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
SOX9-201ENST00000245479 CTAGE5O15320 804 aa13.33□□□□□ -0.28
SOX9-201ENST00000245479 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 B4E1Z4 1266 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 ZSCAN12O43309 604 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
SOX9-201ENST00000245479 RDXP35241 583 aaKnown RBP13.32□□□□□ -0.28
SOX9-201ENST00000245479 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 CUL4AQ13619 759 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 ARID5BQ14865 1188 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms