RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 PTCH2Q9Y6C5 1203 aa16.98■□□□□ 0.31
TNFSF11-201ENST00000239849 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
TNFSF11-201ENST00000239849 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
TNFSF11-201ENST00000239849 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
TNFSF11-201ENST00000239849 XDHP47989 1333 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 CENPFP49454 3210 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 GNRH1P01148 92 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 PRMT2P55345 433 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 GPR153Q6NV75 609 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
TNFSF11-201ENST00000239849 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.3
TNFSF11-201ENST00000239849 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 KIF22Q14807 665 aa16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 ZFYVE28Q9HCC9 887 aa16.95■□□□□ 0.3
TNFSF11-201ENST00000239849 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
TNFSF11-201ENST00000239849 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
TNFSF11-201ENST00000239849 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
TNFSF11-201ENST00000239849 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
TNFSF11-201ENST00000239849 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 SASH1O94885 1247 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 DACT2Q5SW24 774 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 PSME4Q14997 1843 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 CUL9Q8IWT3 2517 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 TAF1P21675 1872 aa16.93■□□□□ 0.3
TNFSF11-201ENST00000239849 LAMB1P07942 1786 aa16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 ANXA1P04083 346 aa16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 ANKRD13AQ8IZ07 590 aa16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 PLBD2Q8NHP8 589 aa16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
TNFSF11-201ENST00000239849 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 CLMNQ96JQ2 1002 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 STXBP5LQ9Y2K9 1186 aa16.91■□□□□ 0.3
TNFSF11-201ENST00000239849 CAPN2P17655 700 aa16.9■□□□□ 0.3
TNFSF11-201ENST00000239849 TAF1CQ15572 869 aaPredicted RBP16.9■□□□□ 0.3
TNFSF11-201ENST00000239849 PTPN18Q99952 460 aa16.9■□□□□ 0.3
TNFSF11-201ENST00000239849 COA1Q9GZY4 146 aa16.9■□□□□ 0.3
TNFSF11-201ENST00000239849 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
TNFSF11-201ENST00000239849 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 MYO1BO43795 1136 aa16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 NFE2L2Q16236 605 aa16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 RANBP2P49792 3224 aaKnown RBP16.89■□□□□ 0.29
TNFSF11-201ENST00000239849 GJA8P48165 433 aa16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 CAP1Q01518 475 aa16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 A0A0C4DFX4 3053 aa16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 CEP290O15078 2479 aa16.88■□□□□ 0.29
TNFSF11-201ENST00000239849 GTF2A2P52657 109 aa16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 DLGAP5Q15398 846 aa16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 LRCH3Q96II8 777 aa16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 COL25A1Q9BXS0 654 aaPredicted RBP16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
TNFSF11-201ENST00000239849 COL6A3P12111 3177 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 SOX1O00570 391 aaPredicted RBP16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 GJB1P08034 283 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 HOXD10P28358 340 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 LACTBP83111 547 aaPredicted RBP16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 UBE2Q1Q7Z7E8 422 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 DEFB123Q8N688 67 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 HELBQ8NG08 1087 aaPredicted RBP16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 OPTNQ96CV9 577 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
TNFSF11-201ENST00000239849 COL4A1P02462 1669 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 EVI5O60447 810 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 GJA5P36382 358 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 TTLL5Q6EMB2 1281 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 MTMR14Q8NCE2 650 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 CDC5LQ99459 802 aaKnown RBP16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
TNFSF11-201ENST00000239849 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 TLR2O60603 784 aa16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 CCL15Q16663 113 aa16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 MS4A4AQ96JQ5 239 aa16.84■□□□□ 0.29
TNFSF11-201ENST00000239849 SSC5DA1L4H1 1573 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms