RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 MYO5BQ9ULV0 1848 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 CCDC194A0A1B0GVG4 234 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 MCM5P33992 734 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 KRT85P78386 507 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 BMP2KLQ5H9B9 411 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 PIBF1Q8WXW3 757 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 ERVV-1B6SEH8 477 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 MBD3O95983 291 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 SCLT1Q96NL6 688 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 PPLO60437 1756 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 SERPINB2P05120 415 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 CALM1P0DP23 149 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 CALM2P0DP24 149 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 CALM3P0DP25 149 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 TEX11Q8IYF3 940 aa9.32□□□□□ -0.92
NANOG-201ENST00000229307 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
NANOG-201ENST00000229307 NLRP5P59047 1200 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 WTAPQ15007 396 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 DLGAP5Q15398 846 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
NANOG-201ENST00000229307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
NANOG-201ENST00000229307 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 CEP85Q6P2H3 762 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 MCM9Q9NXL9 1143 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 STX8Q9UNK0 236 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 PA2G4Q9UQ80 394 aaKnown RBP9.31□□□□□ -0.92
NANOG-201ENST00000229307 SPATA31A5Q5VU36 1347 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 SPATA31A7Q8IWB4 1347 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 NUCB1Q02818 461 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 ZHX3Q9H4I2 956 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
NANOG-201ENST00000229307 RPS6KA4O75676 772 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 IFIT1BQ5T764 474 aaKnown RBP9.3□□□□□ -0.92
NANOG-201ENST00000229307 CCDC148Q8NFR7 591 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 NEURL1BA8MQ27 555 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 OFD1O75665 1012 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 BBOX1O75936 387 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 FILIP1LQ4L180 1135 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 DALRD3Q5D0E6 543 aaKnown RBP9.3□□□□□ -0.92
NANOG-201ENST00000229307 RAD50Q92878 1312 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 RTL9Q8NET4 1388 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 PPEF1O14829 653 aaPredicted RBP9.3□□□□□ -0.92
NANOG-201ENST00000229307 ME1P48163 572 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
NANOG-201ENST00000229307 HEG1Q9ULI3 1381 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 USP16Q9Y5T5 823 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 A0A1B0GUL7 405 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 SSBP05455 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
NANOG-201ENST00000229307 PDE1AP54750 535 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
NANOG-201ENST00000229307 G2E3Q7L622 706 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
NANOG-201ENST00000229307 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 PIGBQ92521 554 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 C8orf76Q96K31 380 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 DCTPP1Q9H773 170 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
NANOG-201ENST00000229307 MATR3P43243 847 aaKnown RBP eCLIP9.29□□□□□ -0.92
NANOG-201ENST00000229307 CCDC93Q567U6 631 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 EAPPQ56P03 285 aaPredicted RBP9.29□□□□□ -0.92
NANOG-201ENST00000229307 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 CLEC4GQ6UXB4 293 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 PRM3Q9NNZ6 103 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 HELLSQ9NRZ9 838 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 SPATA31A1Q5TZJ5 1347 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 MYCNP04198 464 aaPredicted RBP9.29□□□□□ -0.92
NANOG-201ENST00000229307 METAP2P50579 478 aaKnown RBP eCLIP9.29□□□□□ -0.92
NANOG-201ENST00000229307 SYCP1Q15431 976 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 FAM182BQ5T319 152 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 RTKN2Q8IZC4 609 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
NANOG-201ENST00000229307 ZNF408Q9H9D4 720 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 FPGT-TNNI3KV9GXZ4 949 aa9.29□□□□□ -0.92
NANOG-201ENST00000229307 XAGE2Q96GT9 111 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 ZBTB1Q9Y2K1 713 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 NPR1P16066 1061 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 USP48Q86UV5 1035 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 XDHP47989 1333 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 SPON1Q9HCB6 807 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 HAND2P61296 217 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 TEKT1Q969V4 418 aa9.28□□□□□ -0.92
NANOG-201ENST00000229307 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
NANOG-201ENST00000229307 KIF20AO95235 890 aa9.27□□□□□ -0.92
NANOG-201ENST00000229307 CCDC70Q6NSX1 233 aa9.27□□□□□ -0.92
NANOG-201ENST00000229307 SUCLG2Q96I99 432 aa9.27□□□□□ -0.92
NANOG-201ENST00000229307 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.92
NANOG-201ENST00000229307 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms