RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 TFCP2Q12800 502 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 UTP14CQ5TAP6 766 aaKnown RBP20.55■□□□□ 0.88
PRPF19-201ENST00000227524 SMARCC2Q8TAQ2 1214 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 NDUFB9Q9Y6M9 179 aa20.55■□□□□ 0.88
PRPF19-201ENST00000227524 CHGBP05060 677 aa20.54■□□□□ 0.88
PRPF19-201ENST00000227524 SCRN1Q12765 414 aa20.54■□□□□ 0.88
PRPF19-201ENST00000227524 CCDC144BQ3MJ40 725 aa20.54■□□□□ 0.88
PRPF19-201ENST00000227524 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
PRPF19-201ENST00000227524 CACTINQ8WUQ7 758 aaKnown RBP20.54■□□□□ 0.88
PRPF19-201ENST00000227524 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
PRPF19-201ENST00000227524 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
PRPF19-201ENST00000227524 PTPN12Q05209 780 aaKnown RBP20.53■□□□□ 0.88
PRPF19-201ENST00000227524 IQCB1Q15051 598 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 TNNT1P13805 278 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
PRPF19-201ENST00000227524 MCMDC2Q4G0Z9 681 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 SARM1Q6SZW1 724 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
PRPF19-201ENST00000227524 DNAJC2Q99543 621 aaKnown RBP20.53■□□□□ 0.88
PRPF19-201ENST00000227524 LLPHQ9BRT6 129 aaKnown RBP20.53■□□□□ 0.88
PRPF19-201ENST00000227524 ARFGEF2Q9Y6D5 1785 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 PFKFB2O60825 505 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 NCBP1Q09161 790 aaKnown RBP20.52■□□□□ 0.88
PRPF19-201ENST00000227524 SYCP1Q15431 976 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 C11orf57Q6ZUT1 292 aaPredicted RBP20.52■□□□□ 0.88
PRPF19-201ENST00000227524 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 STOX1Q6ZVD7 989 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 HAUS7Q99871 368 aa20.52■□□□□ 0.88
PRPF19-201ENST00000227524 GOLGA6L19H0YKK7 550 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 CEBPZQ03701 1054 aaKnown RBP20.51■□□□□ 0.87
PRPF19-201ENST00000227524 STX1AQ16623 288 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 NAA16Q6N069 864 aaPredicted RBP20.51■□□□□ 0.87
PRPF19-201ENST00000227524 NSUN7Q8NE18 718 aaKnown RBP20.51■□□□□ 0.87
PRPF19-201ENST00000227524 DBNDD2Q9BQY9 259 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 CTAGE5O15320 804 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 CCAR1Q8IX12 1150 aaKnown RBP20.51■□□□□ 0.87
PRPF19-201ENST00000227524 RCOR1Q9UKL0 485 aa20.51■□□□□ 0.87
PRPF19-201ENST00000227524 ITGB4P16144 1822 aa20.5■□□□□ 0.87
PRPF19-201ENST00000227524 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
PRPF19-201ENST00000227524 U2AF2P26368 475 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRPF19-201ENST00000227524 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
PRPF19-201ENST00000227524 GOLPH3LQ9H4A5 285 aa20.5■□□□□ 0.87
PRPF19-201ENST00000227524 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
PRPF19-201ENST00000227524 SPDYE4A6NLX3 237 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 FGD1P98174 961 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 TPD52L1Q16890 204 aaPredicted RBP20.49■□□□□ 0.87
PRPF19-201ENST00000227524 DDX46Q7L014 1031 aaKnown RBP20.49■□□□□ 0.87
PRPF19-201ENST00000227524 MRFAP1L1Q96HT8 127 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 PAXBP1Q9Y5B6 917 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 CTDNEP1O95476 244 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 HMGB1P09429 215 aaKnown RBP20.49■□□□□ 0.87
PRPF19-201ENST00000227524 FOSBP53539 338 aa20.49■□□□□ 0.87
PRPF19-201ENST00000227524 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRPF19-201ENST00000227524 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 NBPF26B4DH59 902 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 NBPF14Q5TI25 921 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 NBPF10Q6P3W6 841 aaKnown RBP20.48■□□□□ 0.87
PRPF19-201ENST00000227524 ANKRD13DQ6ZTN6 518 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 NBPF15Q8N660 670 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 PALLDQ8WX93 1383 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
PRPF19-201ENST00000227524 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 LRRC8AQ8IWT6 810 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 KBTBD3Q8NAB2 608 aa20.48■□□□□ 0.87
PRPF19-201ENST00000227524 APOBRQ0VD83 1088 aa20.47■□□□□ 0.87
PRPF19-201ENST00000227524 SNW1Q13573 536 aaKnown RBP20.47■□□□□ 0.87
PRPF19-201ENST00000227524 CCDC73Q6ZRK6 1079 aa20.47■□□□□ 0.87
PRPF19-201ENST00000227524 GTPBP4Q9BZE4 634 aaKnown RBP20.47■□□□□ 0.87
PRPF19-201ENST00000227524 NEMFO60524 1076 aa20.46■□□□□ 0.87
PRPF19-201ENST00000227524 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
PRPF19-201ENST00000227524 CCDC112Q8NEF3 446 aa20.46■□□□□ 0.87
PRPF19-201ENST00000227524 USP28Q96RU2 1077 aa20.46■□□□□ 0.87
PRPF19-201ENST00000227524 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
PRPF19-201ENST00000227524 PIGBQ92521 554 aa20.46■□□□□ 0.87
PRPF19-201ENST00000227524 ARID5BQ14865 1188 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 CEP135Q66GS9 1140 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 ATL3Q6DD88 541 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 DHX40Q8IX18 779 aaKnown RBP20.45■□□□□ 0.86
PRPF19-201ENST00000227524 ENGASEQ8NFI3 743 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 ZNF396Q96N95 335 aaPredicted RBP20.45■□□□□ 0.86
PRPF19-201ENST00000227524 FEZ1Q99689 392 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 AGXT2Q9BYV1 514 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 SALL1Q9NSC2 1324 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
PRPF19-201ENST00000227524 EXOSC10Q01780 885 aaKnown RBP20.45■□□□□ 0.86
PRPF19-201ENST00000227524 FAM160A1Q05DH4 1040 aa20.45■□□□□ 0.86
PRPF19-201ENST00000227524 ZHX1Q9UKY1 873 aaPredicted RBP20.45■□□□□ 0.86
PRPF19-201ENST00000227524 LRP6O75581 1613 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 BECN2A8MW95 431 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 DSCC1Q9BVC3 393 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 ANO10Q9NW15 660 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 SPATA31A1Q5TZJ5 1347 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 CCT2P78371 535 aaKnown RBP20.44■□□□□ 0.86
PRPF19-201ENST00000227524 HELLSQ9NRZ9 838 aa20.44■□□□□ 0.86
PRPF19-201ENST00000227524 ASAP1Q9ULH1 1129 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms