RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 CCDC94Q9BW85 323 aaPredicted RBP18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 TTLL5Q6EMB2 1281 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 CACTINQ8WUQ7 758 aaKnown RBP18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 ZNF592Q92610 1267 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 SCAND2PQ9GZW5 306 aaPredicted RBP18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 PRDM4Q9UKN5 801 aa18.66■□□□□ 0.58
SNAPC1-201ENST00000216294 CTDNEP1O95476 244 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 ZNF75DP51815 510 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 GJB4Q9NTQ9 266 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 USP27XA6NNY8 438 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 ANKRD1Q15327 319 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 TNS2Q63HR2 1409 aa18.65■□□□□ 0.58
SNAPC1-201ENST00000216294 ELP1O95163 1332 aa18.64■□□□□ 0.58
SNAPC1-201ENST00000216294 ZSCAN25Q6NSZ9 544 aa18.64■□□□□ 0.57
SNAPC1-201ENST00000216294 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
SNAPC1-201ENST00000216294 ASAP1Q9ULH1 1129 aa18.64■□□□□ 0.57
SNAPC1-201ENST00000216294 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
SNAPC1-201ENST00000216294 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 PIGBQ92521 554 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 ATP5JP18859 108 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 USP28Q96RU2 1077 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 ZBTB3Q9H5J0 574 aa18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
SNAPC1-201ENST00000216294 LAMA4Q16363 1823 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 PLA2G4DQ86XP0 818 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 CCAR1Q8IX12 1150 aaKnown RBP18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 GOLGA6L6A8MZA4 724 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 HAND2P61296 217 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
SNAPC1-201ENST00000216294 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 LRRC24Q50LG9 513 aa18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 FILIP1Q7Z7B0 1213 aa18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 PTPDC1A2A3K4 754 aa18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 DDX19AQ9NUU7 478 aaKnown RBP18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 LTBP4Q8N2S1 1624 aa18.61■□□□□ 0.57
SNAPC1-201ENST00000216294 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
SNAPC1-201ENST00000216294 TRMT1Q9NXH9 659 aaKnown RBP18.6■□□□□ 0.57
SNAPC1-201ENST00000216294 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
SNAPC1-201ENST00000216294 PDCL2Q8N4E4 241 aa18.6■□□□□ 0.57
SNAPC1-201ENST00000216294 HMG20BQ9P0W2 317 aa18.6■□□□□ 0.57
SNAPC1-201ENST00000216294 TNNT1P13805 278 aa18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 CASP7P55210 303 aa18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 ISM2Q6H9L7 571 aa18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 ILDR1Q86SU0 546 aaPredicted RBP18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
SNAPC1-201ENST00000216294 TPD52L1Q16890 204 aaPredicted RBP18.58■□□□□ 0.57
SNAPC1-201ENST00000216294 TDRD7Q8NHU6 1098 aaKnown RBP18.58■□□□□ 0.57
SNAPC1-201ENST00000216294 JCADQ9P266 1359 aa18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 A0A1B0GVL5 298 aa18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 IQCB1Q15051 598 aa18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 TSGA10IPQ3SY00 556 aa18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 HAUS7Q99871 368 aa18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
SNAPC1-201ENST00000216294 ME1P48163 572 aa18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 SNW1Q13573 536 aaKnown RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 RBM43Q6ZSC3 357 aaKnown RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 NCBP1Q09161 790 aaKnown RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 MTERF4Q7Z6M4 381 aaKnown RBP18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 PAG1Q9NWQ8 432 aa18.57■□□□□ 0.56
SNAPC1-201ENST00000216294 E7EWF7 191 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 M0R2C6 588 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 BIN1O00499 593 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 NPHP1O15259 732 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 ZSCAN20P17040 1043 aaPredicted RBP18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 ATG9AQ7Z3C6 839 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 DENND2AQ9ULE3 1009 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 GOLGA6L19H0YKK7 550 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 EXOC5O00471 708 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 PI16Q6UXB8 463 aa18.56■□□□□ 0.56
SNAPC1-201ENST00000216294 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms