RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 RESTQ13127 1097 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 NECTIN1Q15223 517 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 SECISBP2LQ93073 1101 aaKnown RBP11.6□□□□□ -0.55
CLDN18-201ENST00000183605 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 RBM43Q6ZSC3 357 aaKnown RBP11.6□□□□□ -0.55
CLDN18-201ENST00000183605 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 SMARCC1Q92922 1105 aaPredicted RBP11.6□□□□□ -0.55
CLDN18-201ENST00000183605 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
CLDN18-201ENST00000183605 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
CLDN18-201ENST00000183605 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
CLDN18-201ENST00000183605 ZRANB2O95218 330 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLDN18-201ENST00000183605 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 CCDC91Q7Z6B0 441 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
CLDN18-201ENST00000183605 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 SASH3O75995 380 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 USP8P40818 1118 aa11.59□□□□□ -0.55
CLDN18-201ENST00000183605 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
CLDN18-201ENST00000183605 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.55
CLDN18-201ENST00000183605 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.56
CLDN18-201ENST00000183605 TET3O43151 1660 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 ARHGAP6O43182 974 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 APOBRQ0VD83 1088 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 AIMP1Q12904 312 aaKnown RBP11.58□□□□□ -0.56
CLDN18-201ENST00000183605 PPFIBP1Q86W92 1011 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 MAP4K1Q92918 833 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 RABEP2Q9H5N1 569 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 FAM53CQ9NYF3 392 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 CPSF1Q10570 1443 aaKnown RBP11.58□□□□□ -0.56
CLDN18-201ENST00000183605 KIAA1210Q9ULL0 1709 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 MARCKSP29966 332 aaPredicted RBP11.58□□□□□ -0.56
CLDN18-201ENST00000183605 TXLNAP40222 546 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 RCOR1Q9UKL0 485 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 KIF1BO60333 1816 aa11.58□□□□□ -0.56
CLDN18-201ENST00000183605 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 NDUFA8P51970 172 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 MTX1Q13505 466 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 BRD3Q15059 726 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 DHX58Q96C10 678 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 C8orf76Q96K31 380 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 RDXP35241 583 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 ANKRD20A12PQ8NF67 263 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 NCAPGQ9BPX3 1015 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 PCDHA7Q9UN72 937 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 ABCC3O15438 1527 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 TTC21BQ7Z4L5 1316 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC151A5D8V7 595 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 GNAT3A8MTJ3 354 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 SPTLC2O15270 562 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 ADKP55263 362 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 MYL5Q02045 173 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 RAB11FIP4Q86YS3 637 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 BANK1Q8NDB2 785 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 GEMIN8Q9NWZ8 242 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 HOOK1Q9UJC3 728 aaKnown RBP11.57□□□□□ -0.56
CLDN18-201ENST00000183605 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
CLDN18-201ENST00000183605 NLRP12P59046 1061 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 TOB2Q14106 344 aaPredicted RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 CNNM3Q8NE01 707 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 ZNF202O95125 648 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 GUCY2CP25092 1073 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 SYKP43405 635 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 LIG3P49916 1009 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 ZNF569Q5MCW4 686 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 WDR24Q96S15 920 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 PES1O00541 588 aaKnown RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 CEP112Q8N8E3 955 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 FAM107BQ9H098 131 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 BICC1Q9H694 974 aaKnown RBP11.56□□□□□ -0.56
CLDN18-201ENST00000183605 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
CLDN18-201ENST00000183605 CTAGE15A4D2H0 777 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC175P0C221 793 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CTAGE8P0CG41 777 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 MAP2K2P36507 400 aa11.55□□□□□ -0.56
CLDN18-201ENST00000183605 CCDC129Q6ZRS4 1044 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms