RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Miga2Q8BK03 593 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ints5Q8CHT3 1018 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 Tubb6Q922F4 447 aa14.08□□□□□ -0.16
Herc4-208ENSMUST00000219577 RictorQ6QI06 1708 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Kcnb2A6H8H5 907 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 1700006A11RikB9EHI3 544 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Oas2E9Q9A9 742 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ftl2P49945 183 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Sec62Q8BU14 398 aaKnown RBP14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Mtmr3Q8K296 1196 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Pik3ap1Q9EQ32 811 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Adgrb1Q3UHD1 1582 aa14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Lrrc59Q922Q8 307 aaKnown RBP14.07□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ahnak2E9PYB0 1738 aaKnown RBP14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cops6O88545 324 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Gm12185Q5NCB2 835 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Tmem266Q8BZB3 538 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Srek1Q8BZX4 494 aaKnown RBP14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 CpvlQ9D3S9 478 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Atp10bB1AWN4 1474 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Tbc1d4Q8BYJ6 1307 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Pet2A2AHY8 747 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Card6E9PWH2 1175 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Mtx1P47802 317 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Vps16Q920Q4 839 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 BrapQ99MP8 591 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Stxbp4Q9WV89 557 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Vmn2r23E9PXI5 849 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Metap2O08663 478 aaKnown RBP14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 TsksO54887 585 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Slc4a1P04919 929 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 NapbP28663 298 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Frat1P70339 274 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Grpel1Q99LP6 217 aa14.06□□□□□ -0.16
Herc4-208ENSMUST00000219577 Simc1E9Q6E9 1354 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Trim34bJ3QNR8 485 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Stx1aO35526 288 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cdc45Q9Z1X9 566 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Casp1P29452 402 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Eif5P59325 429 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ncbp1Q3UYV9 790 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Slf2Q6P9P0 1278 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 9230110C19RikQ8CC70 267 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Acot9Q9R0X4 439 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Prl3d2F6R3P9 224 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cyp2d34L7N463 504 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 U2af2P26369 475 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ccdc162pQ0VG85 912 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 L1td1Q587J6 782 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Cep120Q7TSG1 988 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ift57Q8BXG3 429 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Usp44Q8C2S0 711 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ddx27Q921N6 760 aaKnown RBP14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Zbtb43Q9DAI4 467 aa14.05□□□□□ -0.16
Herc4-208ENSMUST00000219577 Nlrp1aQ2LKU9 1182 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Nlrp9aQ66X03 949 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Dusp9Q7TNL7 452 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Rdm1Q9CQK3 281 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Rnf123Q5XPI3 1314 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Myl3P09542 204 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 TbcaP48428 108 aaKnown RBP14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Eva1cP58659 440 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Sptlc2P97363 560 aaKnown RBP14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Tex2Q6ZPJ0 1128 aaKnown RBP14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 ImmtQ8CAQ8 757 aaKnown RBP14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Lonrf3Q9D4H7 753 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Atp8b3Q6UQ17 1335 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Med1Q925J9 1575 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ccp110Q7TSH4 1004 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Rapgef3Q8VCC8 918 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Efcc1Q9JJF6 558 aa14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Usp42B2RQC2 1324 aaKnown RBP14.04□□□□□ -0.16
Herc4-208ENSMUST00000219577 Gabpb2P81069 414 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Asap2Q7SIG6 958 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ano10Q8BH79 659 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Col4a3bpQ9EQG9 624 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Rapgef4Q9EQZ6 1011 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Lipo1J3QME6 396 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 SfswapQ3USH5 945 aaKnown RBP14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Kcnj14Q8JZN3 434 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Gnl2Q99LH1 728 aaKnown RBP14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Oxsr1Q6P9R2 527 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Alg3Q8K2A8 438 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Golph3lQ8R088 285 aaKnown RBP14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Osbpl5Q9ER64 874 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Dusp10Q9ESS0 483 aa14.03□□□□□ -0.16
Herc4-208ENSMUST00000219577 Ccdc47Q9D024 483 aaKnown RBP14.02□□□□□ -0.16
Herc4-208ENSMUST00000219577 Trim25Q61510 634 aaKnown RBP14.02□□□□□ -0.17
Herc4-208ENSMUST00000219577 Zbtb1Q91VL9 713 aa14.02□□□□□ -0.17
Herc4-208ENSMUST00000219577 Trim34aQ99PP6 485 aa14.02□□□□□ -0.17
Herc4-208ENSMUST00000219577 C3P01027 1663 aa14.02□□□□□ -0.17
Herc4-208ENSMUST00000219577 NgdnQ9DB96 315 aaKnown RBP14.02□□□□□ -0.17
Herc4-208ENSMUST00000219577 Nup153E9Q3G8 1462 aaKnown RBP14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Nbr1P97432 988 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Kiaa0232Q80U59 1396 aaKnown RBP14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Taf3Q5HZG4 932 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Itga6Q61739 1091 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Kcnk13Q8R1P5 405 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Chrna2Q91X60 512 aa14.01□□□□□ -0.17
Herc4-208ENSMUST00000219577 Mapk8ip1Q9WVI9 707 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms