RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Zhx1P70121 873 aa13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ptcd1Q8C2E4 695 aaKnown RBP13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 Mb21d2Q8C525 428 aa13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 Golph3lQ8R088 285 aaKnown RBP13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 ApobrQ8VBT6 942 aa13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 Slc5a4bQ91ZP4 660 aa13.21□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ric1Q69ZJ7 1422 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Prl7a2O54831 253 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ccnl1Q52KE7 532 aaKnown RBP13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Vps54Q5SPW0 977 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Atp1a3Q6PIC6 1013 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Q8BZJ8 459 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ccdc158Q8CDI6 1109 aa13.21□□□□□ -0.3
Lig1-211ENSMUST00000177588 InsrrQ9WTL4 1300 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ess2O70279 479 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Col4a3bpQ9EQG9 624 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Shank2Q80Z38 1476 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 GpkowQ56A08 488 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Gpatch3Q8BIY1 525 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Flad1Q8R123 492 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Trim59Q922Y2 403 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ttll7A4Q9F0 912 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Rgs9O54828 675 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 XpcP51612 930 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Kcnd1Q03719 651 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Tmem87bQ8BKU8 555 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Psrc1Q9D0P7 329 aa13.2□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ddx46Q569Z5 1032 aaKnown RBP13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Nxf7Q80SZ6 620 aaKnown RBP13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Hspa2P17156 633 aa13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Tpm1P58771 284 aa13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Cct2P80314 535 aaKnown RBP13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Dhx38Q80X98 1228 aa13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Dis3l2Q8CI75 870 aaKnown RBP13.19□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ppfia3P60469 1194 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 BrapQ99MP8 591 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Exosc10P56960 887 aaKnown RBP13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Tmem87aQ8BXN9 555 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Rassf8Q8CJ96 419 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Pus3Q9JI38 481 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Sh3bp5Q9Z131 463 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 NpeppsQ11011 920 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Exoc5Q3TPX4 708 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Gm21985Q6P6P5 1106 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ift57Q8BXG3 429 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Hnrnpul1Q8VDM6 859 aaKnown RBP13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Odf2lQ9D478 642 aa13.18□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ripor2Q80U16 1078 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ulbp1Q8HWA3 334 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Erc1Q99MI1 1120 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Pde3aQ9Z0X4 1141 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Tcof1O08784 1320 aaKnown RBP13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Znf568E9PYI1 671 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Smg7Q5RJH6 1138 aaKnown RBP13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Sik1Q60670 779 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Panx2Q6IMP4 677 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Rgs12Q8CGE9 1381 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 MypnQ5DTJ9 1315 aa13.17□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ccdc129Q14B48 1034 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ccdc82Q6PG04 518 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Stac3Q8BZ71 360 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Q8C5K5 320 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Rufy2Q8R4C2 606 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Elf2Q9JHC9 593 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Kcnh4A2A5F7 1018 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Cyp2d10P24456 504 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Sf3b2Q3UJB0 878 aaKnown RBP13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Morc2aQ69ZX6 1030 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Pms1Q8K119 917 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Ccer1Q9CQL2 403 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Naa16Q9DBB4 864 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 LratQ9JI60 231 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 NmiO35309 314 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Sh3bp1P55194 680 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Fsd1Q7TPM6 496 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Kiaa1524Q8BWY9 907 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Eno4Q8C042 619 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Xpo4Q9ESJ0 1151 aa13.16□□□□□ -0.3
Lig1-211ENSMUST00000177588 Cap2Q9CYT6 476 aa13.15□□□□□ -0.3
Lig1-211ENSMUST00000177588 Fam114a1Q9D281 569 aa13.15□□□□□ -0.3
Lig1-211ENSMUST00000177588 Akap11E9Q777 1895 aa13.15□□□□□ -0.3
Lig1-211ENSMUST00000177588 Telo2Q9DC40 840 aaKnown RBP13.15□□□□□ -0.3
Lig1-211ENSMUST00000177588 Marf1Q8BJ34 1730 aaKnown RBP13.15□□□□□ -0.3
Lig1-211ENSMUST00000177588 Cyp2d34L7N463 504 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Paxbp1P58501 919 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Itga6Q61739 1091 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ercc6lQ8BHK9 1240 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Lmbrd2Q8C561 694 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Ginm1Q91WR6 327 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Mei1Q9D4I2 1268 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 AppP12023 770 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 LyarQ08288 388 aaKnown RBP13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Nlrp1aQ2LKU9 1182 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 L1td1Q587J6 782 aaKnown RBP13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Golim4Q8BXA1 655 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Atad2Q8CDM1 1040 aa13.14□□□□□ -0.31
Lig1-211ENSMUST00000177588 Pramel3A2AHA7 463 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gm7903A2AWL1 463 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 AV320801A2AWL3 467 aa13.13□□□□□ -0.31
Lig1-211ENSMUST00000177588 Gm15023L7MUB4 467 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms