RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Otud7bB2RUR8 840 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Gm7347D3YYI9 267 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Speer4aF8VPX6 267 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 VimP20152 466 aaKnown RBP13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Gimap8Q75N62 688 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Exoc3l2D3YUP5 789 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ublcp1Q8BGR9 318 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Plcd1Q8R3B1 756 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Egfl6Q9JJZ5 550 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Txnrd1Q9JMH6 613 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Znf518aB2RRF6 1478 aaKnown RBP13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Proca1B0QZF7 307 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Api5O35841 504 aaKnown RBP13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ccdc25Q78PG9 208 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ddx10Q80Y44 875 aaKnown RBP13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Iffo1Q8BXL9 562 aa13.28□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ampd3O08739 766 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 MycbpapQ5SUV2 932 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Tut1Q8R3F9 869 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 WtapQ9ER69 396 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Abtb2Q7TQI7 1024 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 ThemisQ8BGW0 636 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Kif2bQ8C0N1 668 aa13.27□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ssrp1Q08943 708 aaKnown RBP13.27□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Kank4Q6P9J5 1016 aa13.27□□□□□ -0.29
Ndc1-204ENSMUST00000139560 TxlnaQ6PAM1 554 aaKnown RBP13.27□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Asic3Q6X1Y6 530 aa13.27□□□□□ -0.29
Ndc1-204ENSMUST00000139560 9230110C19RikQ8CC70 267 aa13.27□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gm45140A0A0N4SUM8 220 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Prl7a2O54831 253 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Pla2g4fQ50L41 855 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Leo1Q5XJE5 667 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ercc6lQ8BHK9 1240 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Arid5bQ8BM75 1188 aaKnown RBP13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Uba5Q8VE47 403 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Akap8Q9DBR0 687 aaKnown RBP13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Zcchc17Q9ESX4 241 aaKnown RBP13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Erich3F6QRE9 1637 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Arhgef40Q3UPH7 1517 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Gm28510A0A087WP28 240 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Casp1P29452 402 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 FanccP50652 591 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tbc1d2bQ3U0J8 965 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Smarcc2Q6PDG5 1213 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cplx4Q80WM3 160 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Q8BZJ8 459 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Exoc1Q8R3S6 894 aa13.26□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Rps6kb1Q8BSK8 525 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ccdc122Q8BVN0 290 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Zc3h6Q8BYK8 1177 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Yeats4Q9CR11 227 aaKnown RBP13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Polr2dQ9D7M8 142 aaKnown RBP13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Smco2Q9DA21 347 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Prrc2bQ7TPM1 1486 aaKnown RBP13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Spg7Q3ULF4 781 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Q66JV7 365 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ttc12Q8BW49 704 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 4930504O13RikQ8C5Z9 145 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Letm1Q9Z2I0 738 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ddb1Q3U1J4 1140 aaKnown RBP13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Zfp202Q8C879 641 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ttc5Q99LG4 440 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Uchl5Q9WUP7 329 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Map3k19E9Q3S4 1311 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Zmym3Q9JLM4 1370 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cyp2j7A0A140T8U1 504 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Enc1O35709 589 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Clec11aO88200 328 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cct5P80316 541 aaKnown RBP13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Nek11Q8C0Q4 628 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Erbb4Q61527 1308 aa13.25□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ripply1Q2WG77 201 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ccdc42Q5SV66 316 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Asic1Q6NXK8 526 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Fam213aQ9CYH2 218 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 PdiltQ9DAN1 588 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ces1aE9PYP1 563 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Hoxc9P09633 260 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Anxa1P10107 346 aaKnown RBP13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tmem266Q8BZB3 538 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Osbpl5Q9ER64 874 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Bin2D3Z6Q9 489 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Slc4a4O88343 1079 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Tex35Q14BK3 207 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ddx17Q501J6 650 aaKnown RBP13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Ift74Q8BKE9 600 aa13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Smc1aQ9CU62 1233 aaKnown RBP13.24□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Nf2P46662 596 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Usp5P56399 858 aaKnown RBP13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Igbp1Q61249 340 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Fam160b2Q80YR2 744 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Clic6Q8BHB9 596 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Fam186bD3Z420 943 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Eef2P58252 858 aaKnown RBP13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 IntuQ059U7 942 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Traf3ip1Q149C2 625 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Cavin2Q63918 418 aaKnown RBP13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 HhatQ8BMT9 499 aa13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Lmo7E9PYF4 1699 aaKnown RBP13.23□□□□□ -0.29
Ndc1-204ENSMUST00000139560 Idi1P58044 227 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms