RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Luzp1Q8R4U7 1068 aaKnown RBP13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 SympkQ80X82 1284 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 WdpcpQ8C456 722 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mtmr3Q8K296 1196 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Map2P20357 1828 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Aox2Q5SGK3 1345 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Pde3bQ61409 1100 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Trim25Q61510 634 aaKnown RBP13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Sugp2Q8CH09 1067 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Kcnq3Q8K3F6 873 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Arl8aQ8VEH3 186 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Vps33aQ9D2N9 598 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Clic4Q9QYB1 253 aa13.29□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ubr1O70481 1757 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Tmem109Q3UBX0 243 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Hand2Q61039 217 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Q66JV7 365 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Spata32Q8C5V0 334 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Cgref1Q8R1U2 281 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mrpl44Q9CY73 333 aaKnown RBP13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Rrp1P56183 494 aaKnown RBP13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Kiaa1524Q8BWY9 907 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Mical1Q8VDP3 1048 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Gigyf1Q99MR1 1044 aaKnown RBP13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Col4a3bpQ9EQG9 624 aa13.28□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Zc3h13E9Q784 1729 aaKnown RBP13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Map2k1P31938 393 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Ccdc129Q14B48 1034 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 TatQ8QZR1 454 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Chmp3Q9CQ10 224 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Cep83Q9D5R3 692 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Styxl1Q9DAR2 321 aa13.27□□□□□ -0.28
Prpf40b-208ENSMUST00000136980 Col1a2Q01149 1372 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Zbtb21E9Q444 1094 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Cyp2d34L7N463 504 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Ccdc102aQ3TMW1 549 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Spag5Q7TME2 1165 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Golim4Q8BXA1 655 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Dis3l2Q8CI75 870 aaKnown RBP13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Abcb6Q9DC29 842 aa13.27□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Rgs9O54828 675 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Uri1Q3TLD5 531 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Amotl1Q9D4H4 968 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Ms4a1P19437 291 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Ca8P28651 291 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Timm10P62073 90 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Panx2Q6IMP4 677 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Fam53cQ8BXQ8 393 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Myo1cQ9WTI7 1063 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Hmg20bQ9Z104 317 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Slit2Q9R1B9 1521 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Diaph1O08808 1255 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Hoxa7P02830 229 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Cyp2d10P24456 504 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Nap1l1P28656 391 aaKnown RBP13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 PsapQ61207 557 aaKnown RBP13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Itga6Q61739 1091 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Zbtb40Q6PCS8 1258 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Nek11Q8C0Q4 628 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Ptcd1Q8C2E4 695 aaKnown RBP13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Mb21d2Q8C525 428 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Alg3Q8K2A8 438 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Dnaaf4Q8R368 420 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Stk38Q91VJ4 465 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Lonp2Q9DBN5 852 aa13.26□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 LtkP08923 888 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Drc7Q6V3W6 876 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Creld2Q9CYA0 350 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Large1Q9Z1M7 756 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Pik3c2aQ61194 1686 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Znf335A2A5K6 1337 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Kiaa0232Q80U59 1396 aaKnown RBP13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Arfgef2A2A5R2 1792 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 RubcnlQ3TD16 648 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Gas2l3Q3UWW6 683 aa13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Rbm17Q8JZX4 405 aaKnown RBP13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Tcof1O08784 1320 aaKnown RBP13.25□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Slc1a4O35874 532 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Prkab2Q6PAM0 271 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Smarcc2Q6PDG5 1213 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Sec62Q8BU14 398 aaKnown RBP13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 SdsQ8VBT2 327 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Themis2Q91YX0 663 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 PdiltQ9DAN1 588 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Dnajc10Q9DC23 793 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Sema3fO88632 785 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Ttll12Q3UDE2 639 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 CerkQ8K4Q7 531 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Terf2ipQ91VL8 393 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Zkscan3Q91VW9 553 aa13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Rrs1Q9CYH6 365 aaKnown RBP13.24□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 H2afxP27661 143 aaKnown RBP13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Spty2d1Q68FG3 682 aa13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Usp44Q8C2S0 711 aa13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 PhaxQ9JJT9 385 aaKnown RBP13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Tmem94Q7TSH8 1360 aa13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Klra1P20937 262 aa13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Gm21985Q6P6P5 1106 aa13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Trim56Q80VI1 734 aaKnown RBP13.23□□□□□ -0.29
Prpf40b-208ENSMUST00000136980 Sirt1Q923E4 737 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms