RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Dhx30Q99PU8 1217 aaKnown RBP13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ankib1Q6ZPS6 1085 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ubxn4Q8VCH8 506 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Trim59Q922Y2 403 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Col4a3bpQ9EQG9 624 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 TfrcQ62351 763 aaKnown RBP13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ints5Q8CHT3 1018 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Thsd7aQ69ZU6 1645 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gm21680A0A0G2JGR8 267 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Pramel3A2AHA7 463 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gm7903A2AWL1 463 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 AV320801A2AWL3 467 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Vmn2r23E9PXI5 849 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gm29094F6Q785 221 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gm15023L7MUB4 467 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Dhx40Q6PE54 779 aaKnown RBP13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ube2oQ6ZPJ3 1288 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gpatch3Q8BIY1 525 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Terf2ipQ91VL8 393 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 MthfsQ9D110 203 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Clic4Q9QYB1 253 aa13.45□□□□□ -0.26
Vps54-202ENSMUST00000109578 Bin1O08539 588 aaKnown RBP13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Eya2O08575 532 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 MlecQ6ZQI3 291 aaKnown RBP13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Sos2Q02384 1333 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Stx1aO35526 288 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Anxa1P10107 346 aaKnown RBP13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 XpcP51612 930 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Lrrc8aQ80WG5 810 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Fam102bQ8BQS4 339 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Atad2Q8CDM1 1040 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Trim52Q8CDV4 233 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 U2af1l4Q8BGJ9 220 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gm45140A0A0N4SUM8 220 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 AK157302I3ITR1 129 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ano10Q8BH79 659 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 SdsQ8VBT2 327 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 Isca1Q9D924 129 aa13.44□□□□□ -0.26
Vps54-202ENSMUST00000109578 TnksQ6PFX9 1320 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Mtx1P47802 317 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Asap2Q7SIG6 958 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ssfa2Q922B9 1252 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Rrp1P56183 494 aaKnown RBP13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Atf3Q60765 181 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Slu7Q8BHJ9 585 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 Txnrd1Q9JMH6 613 aa13.43□□□□□ -0.26
Vps54-202ENSMUST00000109578 CebpaP53566 359 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 LyarQ08288 388 aaKnown RBP13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Gsdma2Q32M21 443 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 CtifQ6PEE2 600 aaKnown RBP13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Frat1P70339 274 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Tmem59lQ7TNI2 337 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Q8BZJ8 459 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ccne2Q9Z238 404 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Prl3d2F6R3P9 224 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Zkscan4Q5SZT6 480 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ehd2Q8BH64 543 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Rdm1Q9CQK3 281 aa13.42□□□□□ -0.26
Vps54-202ENSMUST00000109578 Adam1bQ8R534 806 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Tbc1d7Q9D0K0 293 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ubn2Q80WC1 1314 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Cfap99A0A140LIX9 648 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ncaph2Q8BSP2 607 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Stk38Q91VJ4 465 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Fam213aQ9CYH2 218 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Sec62Q8BU14 398 aaKnown RBP13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Smc4Q8CG47 1286 aa13.41□□□□□ -0.26
Vps54-202ENSMUST00000109578 Zscan29E9Q5B4 869 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Cep135Q6P5D4 1140 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Tmem266Q8BZB3 538 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Zbtb21E9Q444 1094 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 CerkQ8K4Q7 531 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ric1Q69ZJ7 1422 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 AtrnQ9WU60 1428 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Prdm1Q60636 856 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Cdca8Q8BHX3 289 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 GptQ8QZR5 496 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Sept12Q9D451 317 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Npc1l1Q6T3U4 1333 aa13.4□□□□□ -0.26
Vps54-202ENSMUST00000109578 Ubap1lG3UW59 384 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Mrps25Q9D125 171 aaKnown RBP13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Slit1Q80TR4 1531 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Tnks1bp1P58871 1720 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Nfatc2ipO09130 412 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Pald1P70261 859 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Tcof1O08784 1320 aaKnown RBP13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Tnnt2P50752 301 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Ank1Q02357 1862 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Fam170aQ66LM6 333 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cep55Q8BT07 462 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Lrrc2Q8VDB8 371 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Sil1Q9EPK6 465 aa13.39□□□□□ -0.27
Vps54-202ENSMUST00000109578 Cyp3a57D3YYZ0 503 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Nbr1P97432 988 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Kiaa0753Q6A000 959 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Luzp1Q8R4U7 1068 aaKnown RBP13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Pde3aQ9Z0X4 1141 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Map10Q8BJS7 891 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Acsbg1Q99PU5 721 aa13.38□□□□□ -0.27
Vps54-202ENSMUST00000109578 Mei1Q9D4I2 1268 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms