RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Cdcp1Q5U462 833 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 9230110C19RikQ8CC70 267 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Trim55G3X8Y1 545 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Miga2Q8BK03 593 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Nphp4P59240 1425 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Qtrt2B8ZXI1 415 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Luc7l2Q7TNC4 392 aaKnown RBP12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Fam177a1Q8BR63 207 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Bloc1s4Q8VED2 215 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Sh3tc1G3X9F6 1346 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Naa16Q9DBB4 864 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 AmfrQ9R049 643 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Acot9Q9R0X4 439 aaKnown RBP12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 TrhQ62361 256 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Naa15Q80UM3 865 aaKnown RBP12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Vps36Q91XD6 386 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Smc1bQ920F6 1248 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Nlgn1Q99K10 843 aa12.59□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ppp1r9aH3BJD6 1292 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Chmp6P0C0A3 200 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Neurog2P70447 263 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ctr9Q62018 1173 aaKnown RBP12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Sp4Q62445 782 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Zmynd15Q8C0R7 736 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Tsr2Q8C8T8 191 aa12.58□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gm12185Q5NCB2 835 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Nsrp1Q5NCR9 542 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Fchsd1Q6PFY1 688 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Trpm2Q91YD4 1506 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Fam186bD3Z420 943 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Prdm1Q60636 856 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Chd1lQ9CXF7 900 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Zkscan16A2ALW2 728 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mx1P09922 631 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Sult6b1P0CC03 303 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tyro3P55144 880 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Krt15Q61414 452 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Dbndd1Q9CZ00 160 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gm42641I6L9G2 585 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ctdp1Q7TSG2 960 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 AtripQ8BMG1 785 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Olfm5Q8BU90 496 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gle1Q8R322 699 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Uba5Q8VE47 403 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ccdc83Q9D4V3 305 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Phkg2Q9DB30 406 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Lonrf3Q9D4H7 753 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Eid1Q9DCR4 169 aa12.58□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Col17a1Q07563 1470 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mast3Q3U214 1321 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Nlrp2Q4PLS0 1046 aaKnown RBP12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 LarsQ8BMJ2 1178 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 CltaO08585 235 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Brd3Q8K2F0 726 aaKnown RBP12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mmp8O70138 465 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Bbof1Q3V079 533 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Snx25Q3ZT31 840 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kank4Q6P9J5 1016 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kiaa1024Q8K3V7 917 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ginm1Q91WR6 327 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Hsf2bpQ9D4G2 338 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 NpcdF8VQB8 469 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Adam1aQ60813 791 aa12.57□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Esyt1Q3U7R1 1092 aaKnown RBP12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ubash3aQ3V3E1 624 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Rps6kb1Q8BSK8 525 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Pdzd9Q9D9M4 266 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Capn12Q9ER56 720 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Sycp2lA0A0M3U1B0 842 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ak9G3UYQ4 1894 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Prl3d2F6R3P9 224 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Kif5bQ61768 963 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Dhx38Q80X98 1228 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Hook3Q8BUK6 718 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Zswim4Q8C7B8 1101 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Pcdhb5Q91XZ5 792 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Prl3d3A0A0M6L0J6 224 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gm30191A0A0U1RNT7 187 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Serpinc1P32261 465 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Dact3Q0PHV7 610 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 P4ha1Q60715 534 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Edc3Q8K2D3 508 aaKnown RBP12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Usp54Q8BL06 1588 aaKnown RBP12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Eif6O55135 245 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Gadd45bP22339 160 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mdh1bQ5F204 500 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Myl10Q62082 202 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 BrapQ99MP8 591 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Tbc1d8Q9Z1A9 1134 aa12.56□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Nfil3O08750 462 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Mapkapk5O54992 473 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Ca8P28651 291 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Pex1Q5BL07 1284 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Sestd1Q80UK0 696 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Skor1Q8BX46 964 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Podxl2Q8CAE9 603 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 A0A1W2P7S8 802 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Wdr70Q3TWF6 657 aa12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 Cdc5lQ6A068 802 aaKnown RBP12.55□□□□□ -0.4
Scn8a-203ENSMUST00000108908 AatkQ80YE4 1365 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 146.8 ms