RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Nxf7Q80SZ6 620 aaKnown RBP10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Chmp7Q8R1T1 451 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tgs1Q923W1 853 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Prc1Q99K43 603 aaKnown RBP10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Q9CYI0 393 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Mei1Q9D4I2 1268 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tpm1P58771 284 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Marf1Q8BJ34 1730 aaKnown RBP10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Rreb1Q3UH06 1700 aaKnown RBP10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cnksr1A2A9K7 700 aa10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cfap58B2RW38 873 aa10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Iqcb1Q8BP00 598 aa10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Gdap1l1Q8VE33 370 aa10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Flt4P35917 1363 aa10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cct4P80315 539 aaKnown RBP10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Etf1Q8BWY3 437 aaKnown RBP10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ptcd1Q8C2E4 695 aaKnown RBP10.71□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tnks1bp1P58871 1720 aa10.71□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Ttll12Q3UDE2 639 aa10.71□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 PsapQ61207 557 aaKnown RBP10.71□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Usp44Q8C2S0 711 aa10.71□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Slit1Q80TR4 1531 aa10.71□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 CebpaP53566 359 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Epha2Q03145 977 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Farp2Q91VS8 1065 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 GzmnQ920S1 248 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Hmgn5Q9JL35 406 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Wdr17E9Q271 1322 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Slc1a4O35874 532 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Adck5Q80V03 582 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Ehd4Q9EQP2 541 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Fut8Q9WTS2 575 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Tmem94Q7TSH8 1360 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Ncoa7Q6DFV7 943 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zbtb3Q91X45 518 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Exosc10P56960 887 aaKnown RBP10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Slu7Q8BHJ9 585 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Kri1Q8VDQ9 704 aaKnown RBP10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Pus3Q9JI38 481 aa10.7□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zranb3Q6NZP1 1069 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zfp446Q8C9M8 523 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Col3a1P08121 1464 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Qtrt2B8ZXI1 415 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Ppfia3P60469 1194 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Mcm6P97311 821 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Cfap69Q8BH53 942 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 ZwintQ9CQU5 252 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Lonp2Q9DBN5 852 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Nek3Q9R0A5 511 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Krt85Q9Z2T6 507 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Sipa1l2Q80TE4 1722 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Psen1P49769 467 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Q8C1R3 189 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Il1rapl2Q9ERS6 686 aa10.69□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Pde4bB1AWC9 736 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Stx1aO35526 288 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Nol10Q5RJG1 687 aaKnown RBP10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Cct8l1Q80YT3 562 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 MbipQ99LQ1 341 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Acsbg1Q99PU5 721 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Golga5Q9QYE6 729 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Myh1Q5SX40 1942 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Pola2P33611 600 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Eif4a1P60843 406 aaKnown RBP10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Q3UJC8 639 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Asnsd1Q8BFS9 627 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Epc1Q8C9X6 813 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Btbd11Q6GQW0 1109 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Mb21d2Q8C525 428 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Syf2Q9D198 242 aaKnown RBP10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Carmil3Q3UFQ8 1375 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Myh6Q02566 1938 aaKnown RBP10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zmym1Q3TJB1 983 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Nek5Q7TSC3 627 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Ppp6r1Q7TSI3 856 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Atf7Q8R0S1 413 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Tomm22Q9CPQ3 142 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Clic4Q9QYB1 253 aa10.68□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Prl2c1Q5SVL9 228 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zc3h6Q8BYK8 1177 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Uap1Q91YN5 522 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Smc1aQ9CU62 1233 aaKnown RBP10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Gm10563F6WIE4 79 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Vmn2r78K7N6U5 853 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Zbtb38Q3LR78 1197 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Rc3h1Q4VGL6 1130 aaKnown RBP10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Tmem59lQ7TNI2 337 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Gpt2Q8BGT5 522 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 BaatQ91X34 420 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Cbx8Q9QXV1 362 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Sipa1l3G3X9J0 1776 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Siglec1Q62230 1695 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Nap1l3Q794H2 544 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 4930550L24RikQ99PA7 320 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Col4a3bpQ9EQG9 624 aa10.67□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Trap1aP19473 224 aa10.66□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Usp5P56399 858 aaKnown RBP10.66□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Nlrp9bQ66X22 1003 aa10.66□□□□□ -0.7
Ccdc171-201ENSMUST00000053414 Adam1bQ8R534 806 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms