RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Hps4Q99KG7 671 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Lbhd1A0A087WPA0 259 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tnni2P13412 182 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Slc38a10Q5I012 1090 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ptpdc1Q6NZK8 747 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Uba5Q8VE47 403 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Mcmdc2E9Q956 681 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Rbm27Q5SFM8 1060 aaKnown RBP8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Krt25Q8VCW2 446 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ccne2Q9Z238 404 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 CfhP06909 1234 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 UvssaQ9D479 717 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tnip1Q9WUU8 647 aa8.27□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Mfap1aC0HKD8 439 aaKnown RBP8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Mfap1bC0HKD9 439 aaKnown RBP8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Skor1Q8BX46 964 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Stag1Q9D3E6 1258 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 4933402E13RikQ9D4D2 429 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ccdc39Q9D5Y1 937 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 TnksQ6PFX9 1320 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Dcdc2bF7BCK0 340 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Mmp8O70138 465 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Abtb2Q7TQI7 1024 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 RabggtaQ9JHK4 567 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Nek4Q9Z1J2 792 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 A0A1W2P7S8 802 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Rbbp8nlA2ABX0 614 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Zbtb7aO88939 569 aaKnown RBP8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Atp8a2P98200 1148 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cdc5lQ6A068 802 aaKnown RBP8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ankrd13aQ80UP5 588 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ccdc51Q3URS9 406 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ppp4r3aQ6P2K6 820 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Sptlc3Q8BG54 563 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Sf3a1Q8K4Z5 791 aaKnown RBP8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Plekhg6Q8R0J1 787 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cog6Q8R3I3 657 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Riok1Q922Q2 567 aa8.26□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Stk36Q69ZM6 1316 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Plekhg2Q6KAU7 1340 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Psmd14O35593 310 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gpatch11Q3UFS4 262 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Eme2Q56A04 373 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ddrgk1Q80WW9 315 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Rbm15bQ6PHZ5 887 aaKnown RBP8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Lmbrd2Q8C561 694 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 GabreA2AMW3 916 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Pde4aO89084 844 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Kif20aP97329 887 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 GmpsQ3THK7 693 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gja3Q64448 417 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Slc44a4Q91VA1 707 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Rlbp1Q9Z275 317 aa8.25□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Dnajc2P54103 621 aaKnown RBP8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Stk11ipQ3TAA7 1072 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Nlrp9bQ66X22 1003 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gtf3c5Q8R2T8 520 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 MthfsQ9D110 203 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 PgfP49764 158 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 DbnlQ62418 436 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Kiaa0754Q69ZZ9 979 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cypt1Q8CH20 168 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tmc2Q8R4P4 888 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ssc5dQ8BV57 1371 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Clrn2B2RVW2 232 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gm4340L7N2C4 268 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Gm5592Q3V0A6 857 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cgnl1Q6AW69 1298 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Aldh1l2Q8K009 923 aa8.24□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Hand2Q61039 217 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Casc1Q6TDU8 730 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Fam160b2Q80YR2 744 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tmem266Q8BZB3 538 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Nup133Q8R0G9 1155 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Nav1Q8CH77 1875 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tbc1d2bQ3U0J8 965 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ehmt1Q5DW34 1296 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Cnot7Q60809 285 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Mageb2A2AHM0 380 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Zkscan2G3X952 960 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 EspnlQ3UYR4 1005 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Kif18aQ91WD7 886 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 NfkbibQ60778 359 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Pde3bQ61409 1100 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Trappc12Q8K2L8 797 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Adam1bQ8R534 806 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Taf5lQ91WQ5 589 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Kdm3aQ6PCM1 1323 aa8.23□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Bms1Q6PGF5 1284 aaKnown RBP8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Usp33Q8R5K2 909 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Atg4a-psA0A0G2JFS9 396 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Tpx2A2APB8 745 aaKnown RBP8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ces1aE9PYP1 563 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Ncf1Q09014 390 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Llgl2Q3TJ91 1027 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Atg9aQ68FE2 551 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Atg4aQ8C9S8 396 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Shtn1Q8K2Q9 631 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Trmt44Q9D2Q2 713 aa8.22□□□□□ -1.09
Bdnf-201ENSMUST00000053317 Fam122aQ9DB52 284 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms