RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Pald1P70261 859 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ncbp1Q3UYV9 790 aaKnown RBP16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Brinp3Q499E0 766 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Clca2Q8BG22 942 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 ImmtQ8CAQ8 757 aaKnown RBP16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Inpp5bQ8K337 993 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Adam1bQ8R534 806 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Aox4Q3TYQ9 1336 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Smg7Q5RJH6 1138 aaKnown RBP16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Il17raQ60943 864 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Fsd1Q7TPM6 496 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Fam160b2Q80YR2 744 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Tmem67Q8BR76 992 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Kcnq5Q9JK45 933 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Tulp1Q9Z273 543 aa16.33■□□□□ 0.21
Lime1-201ENSMUST00000048077 Sik3Q6P4S6 1311 aa16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 Gm973E9Q295 1059 aa16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ftl2P49945 183 aa16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 Rrp1P56183 494 aaKnown RBP16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 Appbp2Q9DAX9 585 aa16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 Sall1Q9ER74 1322 aa16.33■□□□□ 0.2
Lime1-201ENSMUST00000048077 LyarQ08288 388 aaKnown RBP16.32■□□□□ 0.2
Lime1-201ENSMUST00000048077 Kcnf1Q7TSH7 493 aa16.32■□□□□ 0.2
Lime1-201ENSMUST00000048077 Nxf7Q80SZ6 620 aaKnown RBP16.32■□□□□ 0.2
Lime1-201ENSMUST00000048077 Naa16Q9DBB4 864 aa16.32■□□□□ 0.2
Lime1-201ENSMUST00000048077 Gm29094F6Q785 221 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cavin1O54724 392 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Trim56Q80VI1 734 aaKnown RBP16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Srek1Q8BZX4 494 aaKnown RBP16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 MthfsQ9D110 203 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Telo2Q9DC40 840 aaKnown RBP16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Col4a3bpQ9EQG9 624 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Kcnh4A2A5F7 1018 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cyp2d34L7N463 504 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cct2P80314 535 aaKnown RBP16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ncoa5Q91W39 579 aaKnown RBP16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Riok1Q922Q2 567 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Fbxo3Q9DC63 480 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Tbc1d8Q9Z1A9 1134 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Col3a1P08121 1464 aa16.31■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cfap99A0A140LIX9 648 aa16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cyp19a1P28649 503 aa16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ccnl1Q52KE7 532 aaKnown RBP16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ltv1Q6NSQ7 470 aaKnown RBP16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Gpatch3Q8BIY1 525 aa16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Map10Q8BJS7 891 aa16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Rbm10Q99KG3 930 aaKnown RBP16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cap2Q9CYT6 476 aa16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Tcof1O08784 1320 aaKnown RBP16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Marf1Q8BJ34 1730 aaKnown RBP16.3■□□□□ 0.2
Lime1-201ENSMUST00000048077 Stx1aO35526 288 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ptgs1P22437 602 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Spty2d1Q68FG3 682 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Hook1Q8BIL5 728 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Alx1Q8C8B0 326 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Grpel1Q99LP6 217 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Lrp6O88572 1613 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Zkscan8Q8BSL0 588 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Snw1Q9CSN1 536 aaKnown RBP16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ube3bQ9ES34 1070 aa16.29■□□□□ 0.2
Lime1-201ENSMUST00000048077 MetP16056 1379 aa16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 RdxP26043 583 aaKnown RBP16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Fkbp1aP26883 108 aaKnown RBP16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Atp2b3Q0VF55 1220 aa16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ccdc82Q6PG04 518 aa16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ift57Q8BXG3 429 aa16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cdc45Q9Z1X9 566 aa16.28■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cdk4P30285 303 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Pde4dQ01063 747 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Ifit1Q64282 463 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Polr3gQ6NXY9 223 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Cep55Q8BT07 462 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Pcdhb22Q91XZ8 794 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Irx4Q9QY61 515 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Akap11E9Q777 1895 aa16.27■□□□□ 0.2
Lime1-201ENSMUST00000048077 Kansl3A2RSY1 903 aaKnown RBP16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 Znf326O88291 580 aa16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 Gpr182P43142 395 aa16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 Tsen34Q8BMZ5 316 aa16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 Shisa4Q8CA71 197 aa16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 ApobrQ8VBT6 942 aa16.27■□□□□ 0.19
Lime1-201ENSMUST00000048077 Lrp5Q91VN0 1614 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Zbtb38Q3LR78 1197 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Terf2ipQ91VL8 393 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Yeats4Q9CR11 227 aaKnown RBP16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Kndc1Q0KK55 1742 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Prl3d1P18121 224 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Bach1P97302 739 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Nlrp3Q8R4B8 1033 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Hdac6Q9Z2V5 1149 aa16.26■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ssc5dQ8BV57 1371 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Vmn2r23E9PXI5 849 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Tmem59lQ7TNI2 337 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Pknox2Q8BG99 474 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 U2af1l4Q8BGJ9 220 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Tpcn2Q8BWC0 731 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ints4Q8CIM8 964 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 GptQ8QZR5 496 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Ccer1Q9CQL2 403 aa16.25■□□□□ 0.19
Lime1-201ENSMUST00000048077 Odf2lQ9D478 642 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms