RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Zkscan8Q8BSL0 588 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 GptQ8QZR5 496 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ginm1Q91WR6 327 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Nav1Q8CH77 1875 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Slc4a1P04919 929 aa10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cct2P80314 535 aaKnown RBP10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Nucb2P81117 420 aa10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cplx2P84086 134 aa10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Trim59Q922Y2 403 aa10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Hdac6Q9Z2V5 1149 aa10.9□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ubn2Q80WC1 1314 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 1700113H08RikE9Q9Q5 327 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Gm29094F6Q785 221 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Zfp317Q8C0Q5 607 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ncoa5Q91W39 579 aaKnown RBP10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 MthfsQ9D110 203 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pus3Q9JI38 481 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Kcnq5Q9JK45 933 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Polr3gQ6NXY9 223 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Fsd2Q8BZ52 692 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Rapgef4Q9EQZ6 1011 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ube3bQ9ES34 1070 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ift57Q8BXG3 429 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pcdhb22Q91XZ8 794 aa10.89□□□□□ -0.67
Usp28-201ENSMUST00000047349 PappaQ8R4K8 1624 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Clec11aO88200 328 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cops6O88545 324 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Zbtb38Q3LR78 1197 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cdkl5Q3UTQ8 938 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Osbpl5Q9ER64 874 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 MetP16056 1379 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Il17raQ60943 864 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Mx2Q9WVP9 655 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cyp2d10P24456 504 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Fkbp1aP26883 108 aaKnown RBP10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Rrp1P56183 494 aaKnown RBP10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pald1P70261 859 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Lins1Q3U1D0 764 aa10.88□□□□□ -0.67
Usp28-201ENSMUST00000047349 Sik3Q6P4S6 1311 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Stx1aO35526 288 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Prl3d1P18121 224 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Dcaf5Q80T85 946 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Krt84Q99M73 603 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Plekho1Q9JIY0 408 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 FosbP13346 338 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Plbd2Q3TCN2 594 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Kiaa0753Q6A000 959 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Naa16Q9DBB4 864 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Gm45140A0A0N4SUM8 220 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cyp19a1P28649 503 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Rab3gap1Q80UJ7 981 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 CrebrfQ8CDG5 640 aaKnown RBP10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Col4a3bpQ9EQG9 624 aa10.87□□□□□ -0.67
Usp28-201ENSMUST00000047349 Gpr182P43142 395 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Exoc5Q3TPX4 708 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Nlrp9aQ66X03 949 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Abtb2Q7TQI7 1024 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pnma3Q8JZW8 466 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Tulp1Q9Z273 543 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pdia4P08003 638 aaKnown RBP10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Usp28Q5I043 1051 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Sik1Q60670 779 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ccdc82Q6PG04 518 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 U2af1l4Q8BGJ9 220 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Evc2Q8K1G2 1220 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Stk38Q91VJ4 465 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ltbp4Q8K4G1 1666 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Igflr1Q3U4N7 345 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Hand2Q61039 217 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Oxsr1Q6P9R2 527 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Trim56Q80VI1 734 aaKnown RBP10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Terf2ipQ91VL8 393 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Trim34aQ99PP6 485 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Setdb1O88974 1307 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Wdr78E9PYY5 807 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Speer4dL7N216 212 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Tmem109Q3UBX0 243 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Itga6Q61739 1091 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cyp7a1Q64505 503 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Tex2Q6ZPJ0 1128 aaKnown RBP10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Nxf7Q80SZ6 620 aaKnown RBP10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cnot6lQ8VEG6 555 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ttc14Q9CSP9 761 aa10.86□□□□□ -0.67
Usp28-201ENSMUST00000047349 Arap2Q8BZ05 1703 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Me1P06801 572 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Tpcn2Q8BWC0 731 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Telo2Q9DC40 840 aaKnown RBP10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Rgs9O54828 675 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Alx1Q8C8B0 326 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Sipa1l3G3X9J0 1776 aa10.85□□□□□ -0.67
Usp28-201ENSMUST00000047349 Pde8bE9Q4S1 865 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Map10Q8BJS7 891 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Mknk2Q8CDB0 459 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Dnaaf4Q8R368 420 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Yeats4Q9CR11 227 aaKnown RBP10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Zbtb43Q9DAI4 467 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Mast3Q3U214 1321 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 MsnP26041 577 aaKnown RBP10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cdkn1cP49919 348 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Gpr108Q91WD0 569 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms