RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Aldh1l2Q8K009 923 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tab2Q99K90 693 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rbm33Q9CXK9 1231 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc105Q9D4K7 499 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Epb41l3Q9WV92 929 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc6D3YZP9 469 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Dnajc10Q9DC23 793 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gpatch8A2A6A1 1505 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 HellsQ60848 821 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Mxra7Q9CZH7 178 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Hs6st3Q9QYK4 470 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Trap1aP19473 224 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Eef2P58252 858 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Hmgb1P63158 215 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Zfp251Q6PCX8 632 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Plagl1Q9JLQ4 704 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ncoa3O09000 1398 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 BC005561E9Q5E2 1589 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 IntuQ059U7 942 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc162pQ0VG85 912 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Pnpla2Q8BJ56 486 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rbm17Q8JZX4 405 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ankrd50F7BE84 1390 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gm1993A6X8I0 212 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 SlxD3Z347 212 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ranbp1P34022 203 aaKnown RBP11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Aifm3Q3TY86 605 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Kdm5bQ80Y84 1544 aa11.12□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc121E9Q6D3 323 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ufl1Q8CCJ3 793 aaKnown RBP11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gm45015A0A140LII9 184 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 9230110C19RikQ8CC70 267 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Krt7Q9DCV7 457 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Nek5Q7TSC3 627 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 ChkbO55229 394 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tagap1P0CAX8 505 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Fgfr1opQ66JX5 399 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gm45140A0A0N4SUM8 220 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Timm10P62073 90 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Nlrp2Q4PLS0 1046 aaKnown RBP11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Atp1a2Q6PIE5 1020 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cplx4Q80WM3 160 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 LratQ9JI60 231 aa11.11□□□□□ -0.63
Syne1-201ENSMUST00000041639 Mcm7Q61881 719 aaKnown RBP11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gimap5Q8BWF2 308 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ddx23D3Z0M9 819 aaKnown RBP11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Utp18Q5SSI6 552 aaKnown RBP11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cyp27a1Q9DBG1 533 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tldc2A2ACG1 198 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ccdc170D3YXL0 722 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Oas2E9Q9A9 742 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Kif5bQ61768 963 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ehbp1Q69ZW3 1231 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Plcd1Q8R3B1 756 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cabp5Q9JLK3 173 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tnnc1P19123 161 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 SsbP32067 415 aaKnown RBP11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tex35Q14BK3 207 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rab3gap1Q80UJ7 981 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rps6kb1Q8BSK8 525 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Lrsam1Q80ZI6 727 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tut1Q8R3F9 869 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cd274Q9EP73 290 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Fam135bQ9DAI6 1403 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ptgs1P22437 602 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Opa1P58281 960 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Csrnp2Q8BGQ2 534 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Usp37Q8C0R0 979 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tsnaxip1Q99P25 704 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Atp1a4Q9WV27 1032 aa11.1□□□□□ -0.63
Syne1-201ENSMUST00000041639 Eya1P97767 591 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Kiaa1328Q6NZK5 612 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rbm26Q6NZN0 1012 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Smarcc2Q6PDG5 1213 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Kdm1aQ6ZQ88 853 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Slc39a6Q8C145 765 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Clip2Q9Z0H8 1047 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Gnat2P50149 354 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Prdm1Q60636 856 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ankrd13dQ6PD24 605 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Mmp8O70138 465 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Mnat1P51949 309 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Pank2Q3U4S0 443 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Tubb4bP68372 445 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Smarcad1Q04692 1021 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 P4ha1Q60715 534 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Glg1Q61543 1175 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Lamc3Q9R0B6 1581 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Nsd3Q6P2L6 1439 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Eftud2O08810 971 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Sept7O55131 436 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 VimP20152 466 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Cers3Q1A3B0 383 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Eif3j1Q3UGC7 261 aaKnown RBP11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Eif3j2Q66JS6 263 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Prkab2Q6PAM0 271 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Rlbp1Q9Z275 317 aa11.09□□□□□ -0.63
Syne1-201ENSMUST00000041639 Znf568E9PYI1 671 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 PpardP35396 440 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Wdr70Q3TWF6 657 aa11.08□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 191.1 ms