RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 MthfsQ9D110 203 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Kiaa0232Q80U59 1396 aaKnown RBP9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Nphp3Q7TNH6 1325 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Stat1P42225 749 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ehmt1Q5DW34 1296 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slc38a10Q5I012 1090 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccp110Q7TSH4 1004 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rbm28Q8CGC6 750 aaKnown RBP9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Amhr2Q8K592 568 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cep57l1Q8VDS7 400 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Bicd2Q921C5 820 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 ZwintQ9CQU5 252 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccdc39Q9D5Y1 937 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Sept1P42209 366 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Krt84Q99M73 603 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 IcoslgQ9JHJ8 322 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Siglec1Q62230 1695 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gm4340L7N2C4 268 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Prl3d1P18121 224 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cplx1P63040 134 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Terf1P70371 421 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cplx2P84086 134 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Snai1Q02085 264 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Kdm4aQ8BW72 1064 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 DymQ8CHY3 669 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rbm19Q8R3C6 952 aaKnown RBP9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccdc9Q8VC31 543 aaKnown RBP9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Sept12Q9D451 317 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Erich6bQ9D4S6 220 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Tet3Q8BG87 1668 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Syce3B5KM66 88 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Wdhd1P59328 1117 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Samm50Q8BGH2 469 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slc39a11Q8BWY7 342 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Naa30Q8CES0 364 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rufy2Q8R4C2 606 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ppp4r3bQ922R5 820 aa9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccdc47Q9D024 483 aaKnown RBP9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rai14Q9EP71 979 aaKnown RBP9.22□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gm45015A0A140LII9 184 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gm18336A0A140LIU8 765 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Acap3Q6NXL5 833 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Nup133Q8R0G9 1155 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gripap1Q8VD04 806 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Dydc2Q9D3X8 139 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Zbtb43Q9DAI4 467 aa9.21□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ces1hD3Z298 562 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ccdc85cE9Q6B2 420 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Gm29094F6Q785 221 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Hap1O35668 628 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Cyp24a1Q64441 514 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Afg3l2Q8JZQ2 802 aaKnown RBP9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Sumf1Q8R0F3 372 aa9.21□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Elmsan1E9Q2I4 1089 aaKnown RBP9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ube4aE9Q735 1028 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 GabrdP22933 449 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Glg1Q61543 1175 aaKnown RBP9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ttc12Q8BW49 704 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 St5Q924W7 1134 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Adarb2Q9JI20 745 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Robo1O89026 1612 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Sh3tc1G3X9F6 1346 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Cyp2d10P24456 504 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Hnrnpul1Q8VDM6 859 aaKnown RBP9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Pold4Q9CWP8 107 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Bcl9lQ67FY2 1494 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Cfap99A0A140LIX9 648 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Myl3P09542 204 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Kif4P33174 1231 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ppp6r1Q7TSI3 856 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Sept9Q80UG5 583 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Fam102bQ8BQS4 339 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Adam1bQ8R534 806 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Osbpl5Q9ER64 874 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mroh6V9GX81 722 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Wnk3Q80XP9 1757 aa9.2□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Larp6Q8BN59 492 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Rbm43Q99J64 343 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Sh3bgrQ9WUZ7 214 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mast3Q3U214 1321 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Npc1l1Q6T3U4 1333 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mybbp1aQ7TPV4 1344 aaKnown RBP9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Pcdhb9E9Q5G2 828 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Limch1Q3UH68 1057 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ifit1Q64282 463 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ubxn10Q8BG34 277 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Tomm22Q9CPQ3 142 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Antxr1Q9CZ52 562 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Oas2E9Q9A9 742 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Mcm3P25206 812 aaKnown RBP9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Rbm15bQ6PHZ5 887 aaKnown RBP9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Ppp1r10Q80W00 888 aaKnown RBP9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Bloc1s2Q9CWG9 143 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Efcc1Q9JJF6 558 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Tbc1d4Q8BYJ6 1307 aa9.19□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Akap11E9Q777 1895 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Dennd3A2RT67 1274 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Map10Q8BJS7 891 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Olfm5Q8BU90 496 aa9.18□□□□□ -0.94
Ccdc39-201ENSMUST00000029222 Myl6bQ8CI43 207 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms