RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Slf2Q6P9P0 1278 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Smc5Q8CG46 1101 aaKnown RBP16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Slc14a2Q8R4T9 930 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Dpf1Q9QX66 387 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 AmfrQ9R049 643 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Eftud2O08810 971 aaKnown RBP16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Rab34Q64008 259 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Bbs5Q9CZQ9 341 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Fgd6Q69ZL1 1399 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Atf7ipQ7TT18 1306 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Serpinb6bO08804 377 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Slc4a2P13808 1237 aaKnown RBP16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Ms4a1P19437 291 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Ncf1Q09014 390 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Drc3Q9D5E4 523 aa16.22■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Bin1O08539 588 aaKnown RBP16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Igbp1Q61249 340 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Calml3Q9D6P8 149 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Cct2P80314 535 aaKnown RBP16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Asic1Q6NXK8 526 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Tbc1d7Q9D0K0 293 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Ppp1r9aH3BJD6 1292 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Cyp7a1Q64505 503 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Krt25Q8VCW2 446 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 RarsQ9D0I9 660 aaKnown RBP16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Sept3Q9Z1S5 350 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Cpsf2O35218 782 aaKnown RBP16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Ccdc89Q9DA73 370 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Sos2Q02384 1333 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Grin2bQ01097 1482 aa16.21■□□□□ 0.19
Col7a1-201ENSMUST00000026740 Ifih1Q8R5F7 1025 aa16.21■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Fam50bQ9WTJ8 334 aa16.21■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ppp2r5eQ61151 467 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 TnikP83510 1323 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 CadpsQ80TJ1 1355 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ankrd24Q80VM7 985 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Mrps27Q8BK72 415 aaKnown RBP16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Unc13aQ4KUS2 1712 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Stx8O88983 236 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Esyt2Q3TZZ7 845 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ctnna3Q65CL1 895 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 A2mQ6GQT1 1474 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ift20Q61025 132 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 IqcdQ9D3V1 458 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Tbc1d32Q3URV1 1296 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ublcp1Q8BGR9 318 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Plekhg2Q6KAU7 1340 aa16.2■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Q3TYL0 343 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ccdc113Q8C5T8 377 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Mis12Q9CY25 206 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Dnajc21E9Q8D0 531 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Dnm1P39053 867 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Soga3Q6NZL0 945 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Fam163aQ8CAA5 168 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 KaznQ69ZS8 779 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Trim68Q8K243 485 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 NsmfQ99NF2 532 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Echdc1Q9D9V3 322 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Myd88P22366 296 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Vps16Q920Q4 839 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Itgb1bp2Q9R000 350 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Terf2O35144 541 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Taf12Q8VE65 161 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Kif5aP33175 1027 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Eef1dP57776 281 aaKnown RBP16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Adcy3Q8VHH7 1145 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ppp1r10Q80W00 888 aaKnown RBP16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Hs6st3Q9QYK4 470 aa16.19■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Dydc2Q9D3X8 139 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Mrpl12Q9DB15 201 aaKnown RBP16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 MarcksP26645 309 aaKnown RBP16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Exoc3Q6KAR6 755 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ca8P28651 291 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Kdm1aQ6ZQ88 853 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Trim17Q7TPM3 477 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 CenppQ9CZ92 286 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ccpg1Q640L3 753 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Atp6v0a4Q920R6 833 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Naa25Q8BWZ3 972 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Krt20Q9D312 431 aa16.18■□□□□ 0.18
Col7a1-201ENSMUST00000026740 PrxO55103 1391 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Gbp5Q8CFB4 590 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Trove2O08848 538 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Rasa1E9PYG6 1038 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Tuft1O08970 390 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Tcerg1lQ3B807 590 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Asic3Q6X1Y6 530 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Plekhm2Q80TQ5 1018 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cyp4f39Q8BGU0 532 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Lin9Q8C735 542 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 SsbP32067 415 aaKnown RBP16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Dnajc8Q6NZB0 253 aaKnown RBP16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Stx12Q9ER00 274 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Lrrc74aA0A1Y7VMD6 494 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Gm2030D3Z7C4 212 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Hoxb7P09024 217 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Swap70Q6A028 585 aaKnown RBP16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Gm6583E9Q8Z1 469 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cnga4Q3UW12 575 aa16.17■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Magi1Q6RHR9 1471 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms