RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 RbsnQ80Y56 783 aa9.38□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Slc27a3O88561 667 aa9.38□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Cct2P80314 535 aaKnown RBP9.38□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Kif11Q6P9P6 1052 aa9.38□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Sh3tc1G3X9F6 1346 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Kifc2O08672 792 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Paxbp1P58501 919 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Mtus1Q5HZI1 1210 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Fam160b2Q80YR2 744 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Chmp6P0C0A3 200 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Traf1P39428 409 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Smarcc2Q6PDG5 1213 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Dph6Q9CQ28 267 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Arid3aQ62431 601 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Esco1Q69Z69 843 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Kdm6aO70546 1401 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ssh1Q76I79 1042 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Bicd1Q8BR07 835 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Syce1Q9D495 329 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Setbp1Q9Z180 1582 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ankrd35E9Q9D8 996 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Hvcn1Q3U2S8 269 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ppp4r3aQ6P2K6 820 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Slc35g1Q8BY79 368 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Cdk13Q69ZA1 1511 aaKnown RBP9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 RalylQ8BTF8 293 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Mxra7Q9CZH7 178 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Paip2Q9D6V8 124 aa9.37□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Calm1P0DP26 149 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Calm2P0DP27 149 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Calm3P0DP28 149 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Nek5Q7TSC3 627 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Exoc1Q8R3S6 894 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Sec63Q8VHE0 760 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tubb4bP68372 445 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tbc1d5Q80XQ2 815 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Krt25Q8VCW2 446 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tfip11Q9ERA6 838 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Serpinc1P32261 465 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Kif5bQ61768 963 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Sde2Q8K1J5 448 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Scaf11E9PZM7 1456 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Cfap57Q9D180 1249 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Brd3Q8K2F0 726 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Setdb1O88974 1307 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Dapk3O54784 448 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gbp7Q91Z40 638 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Rbm33Q9CXK9 1231 aaKnown RBP9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tldc2A2ACG1 198 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Zscan29E9Q5B4 869 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ube2hP62257 183 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 TchpQ3TVW5 497 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gpr162Q3UN16 588 aa9.36□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Kif14L0N7N1 1674 aaKnown RBP9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Fam186bD3Z420 943 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Plekhm2Q80TQ5 1018 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Msantd4Q91YU3 345 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Stx6Q9JKK1 255 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Robo2Q7TPD3 1470 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Camk4P08414 469 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Sbno1Q689Z5 1390 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Pdia4P08003 638 aaKnown RBP9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Exoc3Q6KAR6 755 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ptcd1Q8C2E4 695 aaKnown RBP9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 MthfsQ9D110 203 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Mkrn1Q9QXP6 481 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Fsip1Q9D3V5 435 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ppp1r9aH3BJD6 1292 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Pknox2Q8BG99 474 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Snw1Q9CSN1 536 aaKnown RBP9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Atxn3Q9CVD2 355 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Cdc42bpgQ80UW5 1551 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gm28919A0A087WP35 240 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ccdc66Q6NS45 935 aa9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Rbm17Q8JZX4 405 aaKnown RBP9.35□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gramd4Q8CB44 633 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Pdzd9Q9D9M4 266 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tacc2Q9JJG0 1149 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Diaph1O08808 1255 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Bsdc1Q80Y55 427 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Sec62Q8BU14 398 aaKnown RBP9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ankrd49Q8VE42 238 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Il1rapl2Q9ERS6 686 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gna11P21278 359 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gjc1P28229 396 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Smarca5Q91ZW3 1051 aaKnown RBP9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tmem2Q5FWI3 1383 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gm12185Q5NCB2 835 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Gm21985Q6P6P5 1106 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tacc3Q9JJ11 631 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Pard3Q99NH2 1333 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Ano8Q6PB70 1060 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 RgmbQ7TQ33 436 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Tmem143Q8VD26 458 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Cabp5Q9JLK3 173 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 CebpzP53569 1052 aaKnown RBP9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Apol7cQ8C6E1 369 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 SltmQ8CH25 1031 aaKnown RBP9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Arhgef6Q8K4I3 771 aa9.34□□□□□ -0.91
Ssr1-201ENSMUST00000021864 Efhd1Q9D4J1 240 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms