RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Atp1a4Q9WV27 1032 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Adgrb1Q3UHD1 1582 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Hnrnph2P70333 449 aaKnown RBP13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Slc39a6Q8C145 765 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Pa2g4P50580 394 aaKnown RBP13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Klra3Q64329 266 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Slu7Q8BHJ9 585 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tsen34Q8BMZ5 316 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Maats1Q8BRC6 783 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tut1Q8R3F9 869 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Rapgef3Q8VCC8 918 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 LlphQ9D945 130 aaKnown RBP13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Scnn1bQ9WU38 638 aa13.33□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Zkscan2G3X952 960 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Zbtb45Q52KG4 520 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ctnna3Q65CL1 895 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Speer4bQ9D9F7 267 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Txnrd1Q9JMH6 613 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Wdr33Q8K4P0 1330 aaKnown RBP13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Cnksr1A2A9K7 700 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Cnnm3Q32NY4 713 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 PsapQ61207 557 aaKnown RBP13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Kirrel3Q8BR86 778 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Slx4ipQ9D7Y9 413 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Echdc1Q9D9V3 322 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ptpn23Q6PB44 1692 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ier5O89113 308 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Klra9Q2TJJ8 266 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Exoc8Q6PGF7 716 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ccdc186Q8C9S4 917 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tada3Q8R0L9 432 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 RestQ8VIG1 1082 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 KynuQ9CXF0 464 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Klra10Q9R1G6 266 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Aox2Q5SGK3 1345 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Arfgef2A2A5R2 1792 aa13.32□□□□□ -0.28
Sdc1-201ENSMUST00000020911 C2cd2E9Q3C1 696 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 F2rP30558 430 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Erlin2Q8BFZ9 340 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Usp27Q8CEG8 438 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 AnlnQ8K298 1121 aaKnown RBP13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Nfat5Q9WV30 1534 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Col15a1O35206 1367 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Col1a2Q01149 1372 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tpx2A2APB8 745 aaKnown RBP13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ccdc66Q6NS45 935 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 SympkQ80X82 1284 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Jakmip1Q8BVL9 626 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 TxlnbQ8VBT1 685 aa13.31□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Pnpla7A2AJ88 1352 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ddx46Q569Z5 1032 aaKnown RBP13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Prkab2Q6PAM0 271 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ttc27Q8CD92 847 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 C1qtnf12Q8R2Z0 308 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 PigbQ9JJQ0 542 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 CoblQ5NBX1 1337 aaKnown RBP13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm21663A0A0G2JE01 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm7361D3Z6R1 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 5031410I06RikE9Q4E0 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm1979E9QAN3 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm5862K7N5V5 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm10220K7N660 267 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Vil1Q62468 827 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Bend3Q6PAL0 825 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Mei4Q8BRM6 389 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Dnm3Q8BZ98 863 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ktn1Q61595 1327 aaKnown RBP13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Rimbp3Q3V0F0 1606 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Mcmdc2E9Q956 681 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Pdzrn3Q69ZS0 1063 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Zbtb40Q6PCS8 1258 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Sh3bgrQ9WUZ7 214 aa13.3□□□□□ -0.28
Sdc1-201ENSMUST00000020911 NeblQ0II04 452 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tgfb1i1Q62219 461 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Atp1a2Q6PIE5 1020 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Znf653Q6YND2 615 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Cct8l1Q80YT3 562 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Smc1bQ920F6 1248 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Smc3Q9CW03 1217 aaKnown RBP13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Klhl34A2AI76 644 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 TrdnE9Q9K5 693 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Igfbp6P47880 238 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Larp1Q6ZQ58 1072 aaKnown RBP13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Edc3Q8K2D3 508 aaKnown RBP13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 KinQ8K339 391 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Kcnk13Q8R1P5 405 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Stk36Q69ZM6 1316 aa13.29□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Ttll7A4Q9F0 912 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Irf9Q61179 399 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Amigo3Q8C2S7 508 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Fbxo18Q8K2I9 1042 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Lztr1Q9CQ33 837 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Phkg2Q9DB30 406 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tceal9Q9DD24 104 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Tet3Q8BG87 1668 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Gm21680A0A0G2JGR8 267 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Klhl33G3UW92 533 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Anks1aP59672 1150 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Trpm3Q5F4S9 1721 aa13.28□□□□□ -0.28
Sdc1-201ENSMUST00000020911 Rgs22G3UYX5 1258 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms