RNA–Protein interactions for RNA: ENST00000595368.5

SUPT5H-208, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-208	ENST00000595368	SYT9	Q86SS6	491 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	GLCCI1	Q86VQ1	547 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	SYS1	Q8N2H4	156 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	ZNF485	Q8NCK3	441 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	OR10H4	Q8NGA5	316 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	ALG8	Q9BVK2	526 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	NAA50	Q9GZZ1	169 aa	Known RBP	13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	TRIM36	Q9NQ86	728 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	RPRD1B	Q9NQG5	326 aa	Known RBP	13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	NKIRAS2	Q9NYR9	191 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	COA3	Q9Y2R0	106 aa	Predicted RBP	13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	GRIP1	Q9Y3R0	1128 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	CACNG2	Q9Y698	323 aa		13.54	□□□□□ -0.24
SUPT5H-208	ENST00000595368	CLDN25	C9JDP6	229 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	IGHV1-46	P01743	117 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	TF	P02787	698 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	GAL	P22466	123 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	SRSF2	Q01130	221 aa	Known RBP	13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	MRPL28	Q13084	256 aa	Known RBP	13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	AQP6	Q13520	282 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	TRAM1	Q15629	374 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	ZMAT1	Q5H9K5	638 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	MBNL2	Q5VZF2	373 aa	Known RBP	13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	VASH1	Q7L8A9	365 aa	Predicted RBP	13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	SLC16A9	Q7RTY1	509 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	SLC35F2	Q8IXU6	374 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	CCL17	Q92583	94 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	TIMD4	Q96H15	378 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	REPIN1	Q9BWE0	567 aa	Known RBP	13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	EGLN1	Q9GZT9	426 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	NUAK2	Q9H093	628 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	MARCH7	Q9H992	704 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	MSL2	Q9HCI7	577 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	STUB1	Q9UNE7	303 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	TMEM14A	Q9Y6G1	99 aa		13.53	□□□□□ -0.24
SUPT5H-208	ENST00000595368	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	4e-9	■□□□□ 10.1
SUPT5H-208	ENST00000595368	ISPD	A4D126	451 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	FAM157A	C9JC47	383 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ZNF670-ZNF695	F2Z2N8	137 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	APOL3	O95236	402 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GPANK1	O95872	356 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	MSMB	P08118	114 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GADD45A	P24522	165 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CRYBB2	P43320	205 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	MMP15	P51511	669 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	DVL1P1	P54792	670 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	TMEM255A	Q5JRV8	349 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SHF	Q7M4L6	423 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	KCTD20	Q7Z5Y7	419 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	LHFPL3	Q86UP9	236 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ZBTB46	Q86UZ6	589 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	PHC2	Q8IXK0	858 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	C1orf174	Q8IYL3	243 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	OR6K6	Q8NGW6	343 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SPATA3	Q8NHX4	192 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SLC7A6	Q92536	515 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ELMOD3	Q96FG2	381 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	TSSK2	Q96PF2	358 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ZNF649	Q9BS31	505 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CYSLTR2	Q9NS75	346 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	HIF1AN	Q9NWT6	349 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	BABAM2	Q9NXR7	383 aa		13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	YLPM1	P49750	1951 aa	Known RBP	13.52	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GYPB	P06028	91 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GAA	P10253	952 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CLU	P10909	449 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GABRA5	P31644	462 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SSX1	Q16384	188 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	MEP1B	Q16820	701 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	DGUOK	Q16854	277 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	FAM209A	Q5JX71	171 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	LINC01590	Q5TEZ4	76 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	OR2G6	Q5TZ20	316 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	OR51F2	Q8NH61	342 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	OR1F12	Q8NHA8	337 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	RAB1C	Q92928	201 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ZMYND19	Q96E35	227 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	WAC	Q9BTA9	647 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SRA1	Q9HD15	236 aa	Known RBP	13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SSR3	Q9UNL2	185 aa		13.51	□□□□□ -0.25
SUPT5H-208	ENST00000595368	RER1	O15258	196 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	HLA-DQA2	P01906	255 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CD1A	P06126	327 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	MRPL3	P09001	348 aa	Known RBP	13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	COX5B	P10606	129 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	LSM6	P62312	80 aa	Known RBP	13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	TNFAIP6	P98066	277 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	DBP	Q10586	325 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	PSG7	Q13046	419 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CDON	Q4KMG0	1287 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	CORO6	Q6QEF8	472 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	PLEKHG7	Q6ZR37	379 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	ZFAND2B	Q8WV99	257 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GATAD2B	Q8WXI9	593 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	TMEM186	Q96B77	213 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	RAB39B	Q96DA2	213 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	GAL3ST1	Q99999	423 aa		13.5	□□□□□ -0.25
SUPT5H-208	ENST00000595368	DCUN1D5	Q9BTE7	237 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms