RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 DOPEY2Q9Y3R5 2298 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 CADP27708 2225 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 B9A039 149 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 CD53P19397 219 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 ACKR3P25106 362 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 DDOSTP39656 456 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
ATG4D-211ENST00000589753 RIPPLY1Q0D2K3 151 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 TNK1Q13470 666 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 ALKBH6Q3KRA9 238 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 OR5AS1Q8N127 324 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 MS4A15Q8N5U1 240 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 BHLHE23Q8NDY6 225 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 CSNK2A3Q8NEV1 391 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 OR51A4Q8NGJ6 313 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 TSEN15Q8WW01 171 aaKnown RBP12.99□□□□□ -0.33
ATG4D-211ENST00000589753 PLEKHA1Q9HB21 404 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 TAAR3PQ9P1P4 343 aa12.99□□□□□ -0.33
ATG4D-211ENST00000589753 USP9YO00507 2555 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-211ENST00000589753 DHRS7CA6NNS2 312 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 CCRL2O00421 344 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 DANCRP0C864 163 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 LIPAP38571 399 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 RPS11P62280 158 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATG4D-211ENST00000589753 SSX1Q16384 188 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 NKPD1Q17RQ9 610 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 MST1LQ2TV78 715 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 C20orf204Q6ZNR8 217 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 FTMTQ8N4E7 242 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 OR8G5Q8NG78 346 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 OR13C5Q8NGS8 318 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 CBLN4Q9NTU7 201 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 NDUFB11Q9NX14 153 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 CGGBP1Q9UFW8 167 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-211ENST00000589753 SCOCQ9UIL1 159 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 GPR160Q9UJ42 338 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 DHDHQ9UQ10 334 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
ATG4D-211ENST00000589753 UTP20O75691 2785 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF816-ZNF321PA0A0X1KG74 233 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 PLSCR5A0PG75 271 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ANKRD30BLA7E2S9 258 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 LMX1BO60663 402 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 SOD3P08294 240 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 OCM2P0CE71 109 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 FAHP16930 419 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ALDH3B1P43353 468 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 SNRPD2P62316 118 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 TRAM1Q15629 374 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 SWI5Q1ZZU3 235 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 Q499Y3 187 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ZBTB37Q5TC79 503 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 DTX2Q86UW9 622 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 ENPP5Q9UJA9 477 aa12.97□□□□□ -0.33
ATG4D-211ENST00000589753 SF3B6Q9Y3B4 125 aaKnown RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 RAI1Q7Z5J4 1906 aaPredicted RBP12.97□□□□□ -0.33
ATG4D-211ENST00000589753 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 A6NIN4 97 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 M0R233 179 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 LILRA1O75019 489 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 SERPINA3P01011 423 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 CD8AP01732 235 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 TFAP2AP05549 437 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF20P17024 532 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 GABRA5P31644 462 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 MAGEB1P43366 347 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 SOX2P48431 317 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 MMP15P51511 669 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 FGGYQ96C11 551 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 C10orf35Q96D05 121 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 SLC30A2Q9BRI3 323 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 TRAF4Q9BUZ4 470 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-211ENST00000589753 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
ATG4D-211ENST00000589753 MSL2Q9HCI7 577 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 TMEM100Q9NV29 134 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 FBXO9Q9UK97 447 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-211ENST00000589753 LAMP3Q9UQV4 416 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 RHBDD3Q9Y3P4 386 aa12.96□□□□□ -0.33
ATG4D-211ENST00000589753 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.34
ATG4D-211ENST00000589753 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
ATG4D-211ENST00000589753 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 CST4P01036 141 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 HLA-DPB1P04440 258 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 CD2P06729 351 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 NAT2P11245 290 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 BMP4P12644 408 aa12.95□□□□□ -0.34
ATG4D-211ENST00000589753 PRF1P14222 555 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms