RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 COMMD4Q9H0A8 199 aa17.31■□□□□ 0.36
ATG4D-208ENST00000588667 NIPAL2Q9H841 368 aa17.31■□□□□ 0.36
ATG4D-208ENST00000588667 PNRC2Q9NPJ4 139 aaKnown RBP17.31■□□□□ 0.36
ATG4D-208ENST00000588667 ITGB1BP2Q9UKP3 347 aa17.31■□□□□ 0.36
ATG4D-208ENST00000588667 ZNF281Q9Y2X9 895 aa17.31■□□□□ 0.36
ATG4D-208ENST00000588667 TMEM212A6NML5 194 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 ZFPL1O95159 310 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 SNRPD2P62316 118 aaKnown RBP17.3■□□□□ 0.36
ATG4D-208ENST00000588667 MST1LQ2TV78 715 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 ZNF829Q3KNS6 432 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-208ENST00000588667 RGS7BPQ6MZT1 257 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-208ENST00000588667 C1orf174Q8IYL3 243 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 LRRC75A-AS1Q8N1F1 130 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 SLC7A6Q92536 515 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 C4orf45Q96LM5 186 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 DCLRE1CQ96SD1 692 aaKnown RBP17.3■□□□□ 0.36
ATG4D-208ENST00000588667 CXXC4Q9H2H0 198 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 PLK3Q9H4B4 646 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 CCDC59Q9P031 241 aaKnown RBP17.3■□□□□ 0.36
ATG4D-208ENST00000588667 R4GMQ9 66 aa17.3■□□□□ 0.36
ATG4D-208ENST00000588667 SC5DO75845 299 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 GATBO75879 557 aaKnown RBP17.29■□□□□ 0.36
ATG4D-208ENST00000588667 IL1AP01583 271 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 SOX6P35712 828 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 CDKN1AP38936 164 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 PTH2RP49190 550 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 TAF13Q15543 124 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 MSMPQ1L6U9 139 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 ACSM3Q53FZ2 586 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 RFPL4BQ6ZWI9 263 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 CEACAM19Q7Z692 300 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 OR10S1Q8NGN2 331 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 CACNG6Q9BXT2 260 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 DDX28Q9NUL7 540 aaKnown RBP17.29■□□□□ 0.36
ATG4D-208ENST00000588667 TBCCD1Q9NVR7 557 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 FBXO9Q9UK97 447 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-208ENST00000588667 OR4C45A6NMZ5 311 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 DBHP09172 617 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 EVX1P49640 407 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 INSL4Q14641 139 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 KRTAP27-1Q3LI81 207 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 WDR38Q5JTN6 314 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 ZNF676Q8N7Q3 588 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 OR1J1Q8NGS3 322 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 PHYHIPQ92561 330 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 PERPQ96FX8 193 aa17.29■□□□□ 0.36
ATG4D-208ENST00000588667 MRPL37Q9BZE1 423 aaKnown RBP17.29■□□□□ 0.36
ATG4D-208ENST00000588667 ITPR3Q14573 2671 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 TMEM269A0A1B0GVZ9 245 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 LOC110117498-PIK3R3F6TDL0 507 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 H7C417 338 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 J3QW42 95 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 CLPXO76031 633 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 CDRT1O95170 752 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 HSD11B1P28845 292 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 MMP16P51512 607 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 ERVS71-1P61550 626 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 GRB2P62993 217 aaKnown RBP17.28■□□□□ 0.36
ATG4D-208ENST00000588667 CATSPERDQ86XM0 798 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 PRSS35Q8N3Z0 413 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 GTF2A1LQ9UNN4 478 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 PMF1-BGLAPU3KQ54 211 aa17.28■□□□□ 0.36
ATG4D-208ENST00000588667 SRSF10O75494 262 aaKnown RBP17.27■□□□□ 0.36
ATG4D-208ENST00000588667 ARL6IP5O75915 188 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 PNPP00491 289 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 NGFP01138 241 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 ZNF250P15622 560 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 RPS19P39019 145 aaKnown RBP17.27■□□□□ 0.36
ATG4D-208ENST00000588667 PPP1CBP62140 327 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 RPS11P62280 158 aaKnown RBP eCLIP17.27■□□□□ 0.36
ATG4D-208ENST00000588667 MFGE8Q08431 387 aaPredicted RBP17.27■□□□□ 0.36
ATG4D-208ENST00000588667 TESK1Q15569 626 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 ZMAT1Q5H9K5 638 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 SYT3Q9BQG1 590 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 SLIRPQ9GZT3 109 aaKnown RBP17.27■□□□□ 0.36
ATG4D-208ENST00000588667 FZR1Q9UM11 496 aa17.27■□□□□ 0.36
ATG4D-208ENST00000588667 TUBG1P23258 451 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 MYL9P24844 172 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 SDC2P34741 201 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 KIR3DL2P43630 455 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 MTNR1BP49286 362 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 ATP5J2P56134 94 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 SELENOVP59797 346 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 RSPO1Q2MKA7 263 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-208ENST00000588667 OR13C5Q8NGS8 318 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 SYNPRQ8TBG9 265 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 THRSPQ92748 146 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 SPTSSAQ969W0 71 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 MOB1AQ9H8S9 216 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 TUBG2Q9NRH3 451 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 SNTG1Q9NSN8 517 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 OR52A1Q9UKL2 312 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 A3GALT2U3KPV4 340 aa17.26■□□□□ 0.35
ATG4D-208ENST00000588667 IGLV3-9A0A075B6K5 115 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 F5H5K5 113 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 ACSM4P0C7M7 580 aa17.25■□□□□ 0.35
ATG4D-208ENST00000588667 MAPK3P27361 379 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 CALRP27797 417 aaKnown RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 OTX1P32242 354 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-208ENST00000588667 PPOXP50336 477 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms