RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 A0A1B0GUH1 482 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 C16orf90A8MZG2 172 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SUPT3HB4E1H0 165 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 GABRPO00591 440 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 TAAR5O14804 337 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 CASC3O15234 703 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 ERI3O43414 337 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SERPINB7O75635 380 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 FGFR1OPO95684 399 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 HLA-HP01893 362 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 HBE1P02100 147 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 RAB4AP20338 218 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 USF1P22415 310 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 HTR1DP28221 377 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SERPINB8P50452 374 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 UBE2E1P51965 193 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 RPS11P62280 158 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 RPEL1Q2QD12 228 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SLC25A35Q3KQZ1 300 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 HIKESHIQ53FT3 197 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SPIN3Q5JUX0 258 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 PIP5KL1Q5T9C9 394 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 STUMQ69YW2 141 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 TWF2Q6IBS0 349 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SSX9Q7RTT3 188 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 LRP11Q86VZ4 500 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 ERO1BQ86YB8 467 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF680Q8NEM1 530 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 C1orf64Q8NEQ6 169 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 GHSRQ92847 366 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 GSDMAQ96QA5 445 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 OR2AG1Q9H205 316 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 C8orf33Q9H7E9 229 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 CCNB1IP1Q9NPC3 277 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 RRAGDQ9NQL2 400 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 MYEF2Q9P2K5 600 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF229Q9UJW7 825 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 SCN1AP35498 2009 aa2.15□□□□□ -2.07
SMCHD1-204ENST00000581226 LRRIQ4A6NIV6 560 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 CEACAM18A8MTB9 384 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 M0R3G1 203 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 MANBAO00462 879 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 NME4O00746 187 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 SCELO95171 688 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 LHBP01229 141 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 MT-ND4P03905 459 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 IFNW1P05000 195 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 TACSTD2P09758 323 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 UBCP0CG48 685 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 STAG3L3P0CL85 134 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 PGA4P0DJD7 388 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 PGA3P0DJD8 388 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 PGA5P0DJD9 388 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 COL8A2P25067 703 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 MEF2BQ02080 365 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 PRKCDQ05655 676 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 BAMBIQ13145 260 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 TAF9Q16594 264 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 TRMT5Q32P41 509 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF829Q3KNS6 432 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 RTL4Q6ZR62 310 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 TMCO2Q7Z6W1 182 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 HORMAD1Q86X24 394 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 APRG1Q8IVJ8 170 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 UBAC2Q8NBM4 344 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 C19orf18Q8NEA5 215 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 CPNE4Q96A23 557 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 ZFP3Q96NJ6 502 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 NAP1L5Q96NT1 182 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 TOLLIPQ9H0E2 274 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 RGS18Q9NS28 235 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 SCN4AP35499 1836 aa2.14□□□□□ -2.07
SMCHD1-204ENST00000581226 NID2Q14112 1375 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 IGKV1-27A0A075B6S5 117 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 GATBO75879 557 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 RPN2P04844 631 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 MYL9P24844 172 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 CD70P32970 193 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 PFN2P35080 140 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 CLDN18P56856 261 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 RAD51Q06609 339 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 MAD2L1BPQ15013 274 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 GABRA6Q16445 453 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 KLHL12Q53G59 568 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 PRSS54Q6PEW0 395 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 OR51F2Q8NH61 342 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 GPX8Q8TED1 209 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 TOP1MTQ969P6 601 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 RERGQ96A58 199 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 RPEQ96AT9 228 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 GPR82Q96P67 336 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 OPALINQ96PE5 141 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 BCL7BQ9BQE9 202 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 UQCC2Q9BRT2 126 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 MARVELD1Q9BSK0 173 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 SHANK2-AS3Q9BTD1 123 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 NUDT9Q9BW91 350 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 ANGPTL4Q9BY76 406 aa2.13□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF442Q9H7R0 627 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms