RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF442Q9H7R0 627 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CYSLTR2Q9NS75 346 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 CA10Q9NS85 328 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 RSL24D1Q9UHA3 163 aaKnown RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 PIGLQ9Y2B2 252 aa9.66□□□□□ -0.86
SHMT2-220ENST00000555634 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
SHMT2-220ENST00000555634 WIPF3A6NGB9 483 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 H3BSH0 61 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 BMP4P12644 408 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 FSTP19883 344 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 RAB3AP20336 220 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 FGF9P31371 208 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SOX6P35712 828 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 GSK3AP49840 483 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 FABP5Q01469 135 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF92Q03936 586 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SPOCK1Q08629 439 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SNTB1Q13884 538 aaKnown RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 OR8B8Q15620 311 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 NKPD1Q17RQ9 610 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 MBNL2Q5VZF2 373 aaKnown RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 C22orf42Q6IC83 251 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 CD200R1LQ6Q8B3 271 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 NAA40Q86UY6 237 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 FBXL14Q8N1E6 418 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 PNLDC1Q8NA58 520 aaKnown RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 OR56B2PQ8NGI1 322 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 OR8S1Q8NH09 359 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 ISOC1Q96CN7 298 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 DERL3Q96Q80 235 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF275Q9NSD4 429 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 MRPL15Q9P015 296 aaKnown RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SLC7A11Q9UPY5 501 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 STARD10Q9Y365 291 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 SIRT4Q9Y6E7 314 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-220ENST00000555634 V9GYS6 101 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 DOPEY1Q5JWR5 2465 aa9.65□□□□□ -0.86
SHMT2-220ENST00000555634 TRBV5-5A0A0J9YX44 114 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 DPRXA6NFQ7 191 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 ANKRD61A6NGH8 418 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 SULT1B1O43704 296 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 NGFP01138 241 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 HCKP08631 526 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 FAHP16930 419 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 PRKACBP22694 351 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 TNFSF4P23510 183 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 PSMD7P51665 324 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 SNRPD2P62316 118 aaKnown RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 FAM3AP98173 230 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 HLXQ14774 488 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 RSPO1Q2MKA7 263 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 CLVS2Q5SYC1 327 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 PLCXD3Q63HM9 321 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 TPRA1Q86W33 373 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 CROCCP3Q8IVE0 287 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 ZDHHC23Q8IYP9 409 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 RDH10Q8IZV5 341 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 BHLHE23Q8NDY6 225 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 OR13C5Q8NGS8 318 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 FBXW5Q969U6 566 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 TMIGD2Q96BF3 282 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 SGK3Q96BR1 496 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 FGGYQ96C11 551 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 CHST5Q9GZS9 411 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 OR51E2Q9H255 320 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 PLK3Q9H4B4 646 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 DYNLRB1Q9NP97 96 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 NOX4Q9NPH5 578 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 TXNL4BQ9NX01 149 aaKnown RBP9.64□□□□□ -0.87
SHMT2-220ENST00000555634 DUSP13Q9UII6 198 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 FOXJ3Q9UPW0 622 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
SHMT2-220ENST00000555634 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 A6NNC1 897 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 CD300LBA8K4G0 201 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 IGLV3-1P01715 115 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 UCHL1P09936 223 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 IGFBP2P18065 325 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 SERPINB10P48595 397 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 MTNR1BP49286 362 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 FABP6P51161 128 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 LSM3P62310 102 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 PARP16Q8N5Y8 322 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 PLPP7Q8NBV4 271 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 OR51A4Q8NGJ6 313 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 RGP1Q92546 391 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 AP3S1Q92572 193 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 PIGTQ969N2 578 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 MRPL24Q96A35 216 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 SPSB1Q96BD6 273 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 HAVCR1Q96D42 359 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 DGCR14Q96DF8 476 aaKnown RBP9.63□□□□□ -0.87
SHMT2-220ENST00000555634 CMBLQ96DG6 245 aa9.63□□□□□ -0.87
SHMT2-220ENST00000555634 MARS2Q96GW9 593 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms