RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 NAAAQ02083 359 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 DOC2BQ14184 412 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 HSD17B12Q53GQ0 312 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 UNQ9370/PRO34162Q6UXP9 181 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 SLC16A12Q6ZSM3 486 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 Q6ZSR3 168 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 USP43Q70EL4 1123 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 MRPL21Q7Z2W9 205 aaKnown RBP8.22□□□□□ -1.09
YBX3-215ENST00000544504 CEACAM19Q7Z692 300 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 TPRA1Q86W33 373 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 DMRTC2Q8IXT2 367 aaPredicted RBP8.22□□□□□ -1.09
YBX3-215ENST00000544504 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 OR51E1Q8TCB6 317 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 SPSB4Q96A44 273 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 MS4A3Q96HJ5 214 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 RADILQ96JH8 1075 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 OR51E2Q9H255 320 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 ESRP2Q9H6T0 727 aaKnown RBP8.22□□□□□ -1.09
YBX3-215ENST00000544504 GPR84Q9NQS5 396 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 TXNL4BQ9NX01 149 aaKnown RBP8.22□□□□□ -1.09
YBX3-215ENST00000544504 EDARQ9UNE0 448 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 N6AMT1Q9Y5N5 214 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
YBX3-215ENST00000544504 TRAV1-2A0A0B4J238 106 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 IGHV2OR16-5A0A0B4J2B6 119 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 NKX2-6A6NCS4 301 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 KIAA1324LA8MWY0 1029 aaPredicted RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 H3BMQ9 156 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 P2RY10O00398 339 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 PDCD5O14737 125 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 CASKO14936 926 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 TMEM127O75204 238 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 GPX5O75715 221 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 IL1AP01583 271 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 IGLV3-1P01715 115 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 ZNF35P13682 527 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 ZNF20P17024 532 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 GNALP38405 381 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 MTNR1BP49286 362 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 UCP2P55851 309 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 PPP1CBP62140 327 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 RPS11P62280 158 aaKnown RBP eCLIP8.21□□□□□ -1.1
YBX3-215ENST00000544504 PPP3R1P63098 170 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 CTF1Q16619 201 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 GFOD2Q3B7J2 385 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 C22orf42Q6IC83 251 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 PGAP1Q75T13 922 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 CROCCP3Q8IVE0 287 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 CSNK2A3Q8NEV1 391 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 OR5D14Q8NGL3 314 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 PP6455Q8WZ26 134 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 TMEM106AQ96A25 262 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 SGK3Q96BR1 496 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 C12orf43Q96C57 262 aaKnown RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 REEP6Q96HR9 211 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 TECTBQ96PL2 329 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 DERL3Q96Q80 235 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 C1QTNF6Q9BXI9 259 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 TCF7L1Q9HCS4 588 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 NPDC1Q9NQX5 325 aaPredicted RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 ZNF275Q9NSD4 429 aaPredicted RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 SNTG1Q9NSN8 517 aa8.21□□□□□ -1.1
YBX3-215ENST00000544504 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.1
YBX3-215ENST00000544504 TRBV5-7A0A0A0MS05 114 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 A0A1B0GTI1 187 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SMPD2O60906 423 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 GOSR1O95249 250 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 CELA3BP08861 270 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 CCL2P13500 99 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 RAC2P15153 192 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 FSTP19883 344 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 DNASE1P24855 282 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 CD40P25942 277 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 THBS4P35443 961 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SOX6P35712 828 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SELENOVP59797 346 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 VBP1P61758 197 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 HGFACQ04756 655 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 TFF3Q07654 80 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 RIPPLY1Q0D2K3 151 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 ODF4Q2M2E3 257 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SNAI3Q3KNW1 292 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 ZNF718Q3SXZ3 478 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 BEX5Q5H9J7 111 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 GLYATL3Q5SZD4 288 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 ALKBH2Q6NS38 261 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 FBXW12Q6X9E4 464 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 TMEM91Q6ZNR0 172 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 NAA40Q86UY6 237 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SERPINA12Q8IW75 414 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 RDH10Q8IZV5 341 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 PARP16Q8N5Y8 322 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms