RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RNF126Q9BV68 326 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GSKIPQ9P0R6 139 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 VAX2Q9UIW0 290 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 DHRS7CA6NNS2 312 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PIN1P1O15428 100 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 FRS3O43559 492 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PGA4P0DJD7 388 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PGA5P0DJD9 388 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 P2RY2P41231 377 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 RPS11P62280 158 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PRAMEF8Q5VWM4 474 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PRAMEF7Q5VXH5 474 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 LEG1Q6P5S2 330 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 FAM129CQ86XR2 697 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF101Q8IZC7 436 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 CYB561A3Q8NBI2 242 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 OR51D1Q8NGF3 324 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZMYND19Q96E35 227 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GTF2A1LQ9UNN4 478 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 VSIG4Q9Y279 399 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 RPP14O95059 124 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 BCKDHBP21953 392 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TEAD1P28347 426 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 OR10J1P30954 320 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 BMI1P35226 326 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 IER5LQ5T953 404 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 STPG1Q5TH74 334 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 MDGA2Q7Z553 956 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 OR5AK2Q8NH90 309 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 ADAMTS15Q8TE58 950 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TECTBQ96PL2 329 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 C6orf106Q9H6K1 298 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 PDE7BQ9NP56 450 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A087WV62 115 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TRBV11-1A0A0K0K1C0 115 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A1W2PPC4 97 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 STK17BO94768 372 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TBX6O95947 436 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TSFMP43897 325 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB7AP51149 207 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 DUSP5Q16690 384 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 BTNL3Q6UXE8 466 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 P4HA3Q7Z4N8 544 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 CBARPQ8N350 705 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TMEM255BQ8WV15 326 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC6A7Q99884 636 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 GABRG3Q99928 467 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 FOXJ2Q9P0K8 574 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 HS3ST3A1Q9Y663 406 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 LOC100289279A0A1B0GTE1 492 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 XKRY2A2RUG3 117 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 XKRYO14609 159 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 ERCC1P07992 297 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC35G6P0C7Q6 338 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 GLIPR1P48060 266 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 EGR3Q06889 387 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 CRMP1Q14194 572 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 KCNMB1Q16558 191 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF542PQ5EBM4 170 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 GDF7Q7Z4P5 450 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 HSD11B1LQ7Z5J1 315 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 IL22RA1Q8N6P7 574 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 DEFB124Q8NES8 71 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 OR13C9Q8NGT0 318 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 HDAC8Q9BY41 377 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 SIDT1Q9NXL6 827 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 HS3ST3B1Q9Y662 390 aa9.75□□□□□ -0.85
CLSTN3-207ENST00000537408 TRBV5-4A0A0C4DH59 114 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 TLCD2A6NGC4 264 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 B4DEV8 164 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 PEX12O00623 359 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 EFSO43281 561 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 GYPBP06028 91 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 HOXC12P31275 282 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 C16orf54Q6UWD8 224 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 GALNTL5Q7Z4T8 443 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF429Q86V71 674 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF100Q8IYN0 542 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 PCBD2Q9H0N5 130 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB18Q9NP72 206 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 FKBP11Q9NYL4 201 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 CCDC88CQ9P219 2028 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A1W2PS29 197 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 FTCDNL1E5RQL4 147 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 DUX1O43812 170 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 GABRA4P48169 554 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB35Q15286 201 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 ZXDCQ2QGD7 858 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 PMS2CLQ68D20 193 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 OR4S1Q8NGB4 309 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 OR51F2Q8NH61 342 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
CLSTN3-207ENST00000537408 SCGB3A2Q96PL1 93 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms