RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MERTKQ12866 999 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 SNTB2Q13425 540 aaKnown RBP4.17□□□□□ -1.74
CLIP1-207ENST00000536634 FAM83EQ2M2I3 478 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 SPIN4Q56A73 249 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ANKRD26P1Q6NSI1 321 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 C17orf107Q6ZR85 190 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 LRP11Q86VZ4 500 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CTAGE3PQ8IX95 158 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 MMGT1Q8N4V1 131 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 POM121L12Q8N7R1 296 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 COX18Q8N8Q8 333 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ZIC4Q8N9L1 334 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 OR5W2Q8NH69 310 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 PIGXQ8TBF5 258 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CDKL2Q92772 493 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 RDH5Q92781 318 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CDS1Q92903 461 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ANKRD27Q96NW4 1050 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 MS4A4EQ96PG1 132 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 ALKBH3Q96Q83 286 aaPredicted RBP4.17□□□□□ -1.74
CLIP1-207ENST00000536634 RABEP2Q9H5N1 569 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 NOX3Q9HBY0 568 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CTPS2Q9NRF8 586 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 TAS2R7Q9NYW3 318 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 BAIAP2L1Q9UHR4 511 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 FZR1Q9UM11 496 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 SNX6Q9UNH7 406 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 CCL27Q9Y4X3 112 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CLIP1-207ENST00000536634 A0A087WZ39 114 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ARPC4-TTLL3A0A0A6YYG9 625 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ACOD1A6NK06 481 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 TRIM49D1C9J1S8 452 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 F8VVB4 439 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 F8VWA3 439 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 GPR171O14626 319 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SCAMP2O15127 329 aaKnown RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ZNF264O43296 627 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 PRAF2O60831 178 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 OTCP00480 354 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 IFI6P09912 130 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ANPEPP15144 967 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 LCN1P31025 176 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 MAGEB1P43366 347 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 OR2B6P58173 313 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 UBE2NP61088 152 aaKnown RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 LCN2P80188 198 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 MRPS25P82663 173 aaKnown RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 RIGQ13278 110 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SKP2Q13309 424 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SLC17A1Q14916 467 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ALKBH6Q3KRA9 238 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 VPS26BQ4G0F5 336 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 VAX1Q5SQQ9 334 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 PDZK1Q5T2W1 519 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 KPRPQ5T749 579 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 OLFML2AQ68BL7 652 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 C16orf87Q6PH81 154 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 OLIG3Q7RTU3 272 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 WDFY1Q8IWB7 410 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 CCDC63Q8NA47 563 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SPC24Q8NBT2 197 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 OR4D10Q8NGI6 311 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 ACTRT1Q8TDG2 376 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 PYROXD1Q8WU10 500 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 BCL2L2Q92843 193 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 AURKBQ96GD4 344 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 KCNA7Q96RP8 456 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 THUMPD3Q9BV44 507 aaKnown RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SHCBP1LQ9BZQ2 653 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 RNF121Q9H920 327 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 MIEF1Q9NQG6 463 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 MMP26Q9NRE1 261 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 NMRK1Q9NWW6 199 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 PLEK2Q9NYT0 353 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 NUP50Q9UKX7 468 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 SLC9A8Q9Y2E8 581 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 RRP15Q9Y3B9 282 aaKnown RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 POLR3HQ9Y535 204 aaPredicted RBP4.16□□□□□ -1.74
CLIP1-207ENST00000536634 CACNG2Q9Y698 323 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 KCNE3Q9Y6H6 103 aa4.16□□□□□ -1.74
CLIP1-207ENST00000536634 A0A1W2PPW3 197 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 A8MT66 165 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 H3BNH8 94 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 EIF4E2O60573 245 aaKnown RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 UPK3AO75631 287 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 HMGN2P05204 90 aaKnown RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 ALOX5P09917 674 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 UBTFL6P0CB48 400 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 BCKDHAP12694 445 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 CCNA2P20248 432 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 CAPGP40121 348 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 EVX1P49640 407 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 FOXA1P55317 472 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 RAG2P55895 527 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 MRPS11P82912 194 aaKnown RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 NPRL3Q12980 569 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 LASP1Q14847 261 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms