RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 TCEAL6Q6IPX3 200 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 C1QL2Q7Z5L3 287 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 APCDD1LQ8NCL9 501 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 TMEM234Q8WY98 164 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 TCEAL3Q969E4 200 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 GABRG3Q99928 467 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 CMSS1Q9BQ75 279 aaKnown RBP8.54□□□□□ -1.04
PHF3-208ENST00000506783 C1orf198Q9H425 327 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 ZNF442Q9H7R0 627 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 TAS2R8Q9NYW2 309 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
PHF3-208ENST00000506783 OR6C76A6NM76 312 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 TNFRSF10CO14798 259 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ATXN7O15265 892 aaPredicted RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 OR13C7P0DN81 318 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 EFNA3P52797 238 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ZNF141Q15928 474 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 IAH1Q2TAA2 248 aaPredicted RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 H1FNTQ75WM6 255 aaPredicted RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 TXNIPQ9H3M7 391 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 TNFSF14O43557 240 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 IL33O95760 270 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ASAH2BP0C7U1 165 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 FHITP49789 147 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 FGL1Q08830 312 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 RAB32Q13637 225 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 SNTB1Q13884 538 aaKnown RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 ELAVL1Q15717 326 aaKnown RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 FAM122BQ7Z309 247 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 PNLDC1Q8NA58 520 aaKnown RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 SERINC1Q9NRX5 453 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 HAO2Q9NYQ3 351 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 RABL2BQ9UNT1 228 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 MED13Q9UHV7 2174 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 COL12A1Q99715 3063 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 SULT1C2O00338 296 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 LRP3O75074 770 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 TGM6O95932 706 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 B4GALT1P15291 398 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 CX3CR1P49238 355 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 SLC26A5P58743 744 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 SLC35D3Q5M8T2 416 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 MANEAQ5SRI9 462 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ADAM5Q6NVV9 412 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 CDH26Q8IXH8 852 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ZNF440Q8IYI8 595 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 ZNF837Q96EG3 531 aaPredicted RBP8.53□□□□□ -1.04
PHF3-208ENST00000506783 GUCD1Q96NT3 240 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 FAAP24Q9BTP7 215 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 MFRPQ9BY79 579 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 PRRG4Q9BZD6 226 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.53□□□□□ -1.045e-7■■■■□ 22.3
PHF3-208ENST00000506783 EDARQ9UNE0 448 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 PIGLQ9Y2B2 252 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 RFNGQ9Y644 331 aa8.53□□□□□ -1.04
PHF3-208ENST00000506783 MSGN1A6NI15 193 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ZNF814B7Z6K7 855 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 PLPP3O14495 311 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 OR2T1O43869 369 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 RBMXL2O75526 392 aaKnown RBP8.52□□□□□ -1.05
PHF3-208ENST00000506783 VSIG8P0DPA2 414 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ICAM2P13598 275 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 RPS4Y1P22090 263 aaKnown RBP8.52□□□□□ -1.05
PHF3-208ENST00000506783 IL32P24001 234 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 GABREP78334 506 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 CEBPEQ15744 281 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 DNM1P34Q6PK57 102 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 GRINAQ7Z429 371 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 OR1M1Q8NGA1 313 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 STOML3Q8TAV4 291 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ARRDC1-AS1Q9H2J1 176 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 PUS1Q9Y606 427 aaKnown RBP eCLIP8.52□□□□□ -1.05
PHF3-208ENST00000506783 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 CACNA1AO00555 2505 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 PCNX2A6NKB5 2137 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 DDAH2O95865 285 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 FUT7Q11130 342 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 CDC6Q99741 560 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 RABL2AQ9UBK7 228 aaPredicted RBP8.52□□□□□ -1.05
PHF3-208ENST00000506783 AMDHD2Q9Y303 409 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ZXDAP98168 799 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 SMCO1Q147U7 214 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 RSU1Q15404 277 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 TMEM244Q5VVB8 128 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
PHF3-208ENST00000506783 CLEC1AQ8NC01 280 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 OR14L1PQ8NHC6 308 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ZNF416Q9BWM5 594 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 OR5AC2Q9NZP5 309 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 ZNF319Q9P2F9 582 aa8.52□□□□□ -1.05
PHF3-208ENST00000506783 DKKL1Q9UK85 242 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms