RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 LIPAP38571 399 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 ZNF92Q03936 586 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 TPBGQ13641 420 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 CLEC9AQ6UXN8 241 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 Q71RC1 249 aaPredicted RBP11.52□□□□□ -0.57
MSH6-208ENST00000493177 PGAP1Q75T13 922 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 GPR141Q7Z602 305 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 MUC15Q8N387 334 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 TSEN15Q8WW01 171 aaKnown RBP11.52□□□□□ -0.57
MSH6-208ENST00000493177 TMEM203Q969S6 136 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 DHRS9Q9BPW9 319 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 OR2J1Q9GZK6 312 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 RGCCQ9H4X1 137 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 ZNF701Q9NV72 531 aaPredicted RBP11.52□□□□□ -0.57
MSH6-208ENST00000493177 FZR1Q9UM11 496 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 ZNF281Q9Y2X9 895 aa11.52□□□□□ -0.57
MSH6-208ENST00000493177 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 GGT3PA6NGU5 568 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 TRIM64BA6NI03 449 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 E7EQL1 145 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 ICMTO60725 284 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 TFAP2AP05549 437 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CD1AP06126 327 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 BMP4P12644 408 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CD36P16671 472 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 ACHEP22303 614 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CFL1P23528 166 aaKnown RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 TTKP33981 857 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 THBS4P35443 961 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 GLRXP35754 106 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 RPL5P46777 297 aaKnown RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 PRSS12P56730 875 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 RPS25P62851 125 aaKnown RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 GPR50Q13585 617 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 HLXQ14774 488 aaPredicted RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 SSX1Q16384 188 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CLEC12BQ2HXU8 276 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 ZNF718Q3SXZ3 478 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 DOK3Q7L591 496 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 C1orf174Q8IYL3 243 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 NUP37Q8NFH4 326 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 OR13C5Q8NGS8 318 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 RPS4Y2Q8TD47 263 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CMBLQ96DG6 245 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 LYZL4Q96KX0 146 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 PGLYRP3Q96LB9 341 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 TRAF4Q9BUZ4 470 aaPredicted RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 BARX1Q9HBU1 254 aaPredicted RBP11.51□□□□□ -0.57
MSH6-208ENST00000493177 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 CBLN4Q9NTU7 201 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 ZNF391Q9UJN7 358 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 HHLA2Q9UM44 414 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 RTTNQ86VV8 2226 aa11.51□□□□□ -0.57
MSH6-208ENST00000493177 VSTM5A8MXK1 200 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 MTRF1O75570 445 aaKnown RBP11.5□□□□□ -0.57
MSH6-208ENST00000493177 SERPINA3P01011 423 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 ISG15P05161 165 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 PAX1P15863 534 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 TUBG1P23258 451 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 GABRA5P31644 462 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 SOX2P48431 317 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 ALDH3B2P48448 385 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 GK2Q14410 553 aaPredicted RBP11.5□□□□□ -0.57
MSH6-208ENST00000493177 YIF1BQ5BJH7 314 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 MS4A15Q8N5U1 240 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 OR13C3Q8NGS6 347 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 OR10AC1Q8NH08 325 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
MSH6-208ENST00000493177 GPR148Q8TDV2 347 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 SMR3AQ99954 134 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 OPA3Q9H6K4 179 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 PLEKHA1Q9HB21 404 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 CA10Q9NS85 328 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 DUSP13Q9UII6 198 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 CMAHPQ9Y471 501 aa11.5□□□□□ -0.57
MSH6-208ENST00000493177 A0A1B0GTI1 187 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 RGS9O75916 674 aaPredicted RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 OCM2P0CE71 109 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 SELEP16581 610 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 ZNF12P17014 697 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 ZNF20P17024 532 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 PSMA1P25786 263 aaKnown RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
MSH6-208ENST00000493177 MPV17P39210 176 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 GSK3AP49840 483 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 SELENOVP59797 346 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 FAM3AP98173 230 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 TRAM1Q15629 374 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 OR2T2Q6IF00 324 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
MSH6-208ENST00000493177 OR5AS1Q8N127 324 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms