RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 C11orf71Q6IPW1 123 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 TSPAN14Q8NG11 270 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 OR13G1Q8NGZ3 307 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 OR2AE1Q8NHA4 323 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 CXorf56Q9H5V9 222 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 ABCB9Q9NP78 766 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 TMEM100Q9NV29 134 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 NKIRAS2Q9NYR9 191 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 LAMP3Q9UQV4 416 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 DSCAMO60469 2012 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 C5orf63A6NC05 138 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 OVOL3O00110 214 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 SYT7O43581 403 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 ZFPL1O95159 310 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 LALBAP00709 142 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 PRF1P14222 555 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 KIR3DL2P43630 455 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 MMP15P51511 669 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 GTF2A1P52655 376 aaPredicted RBP13.11□□□□□ -0.31
CCM2-215ENST00000482714 NKPD1Q17RQ9 610 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 UBE2UQ5VVX9 321 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 SPERTQ8NA61 448 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 SEMA6DQ8NFY4 1073 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 THRSPQ92748 146 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 NINJ1Q92982 152 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 LYZL4Q96KX0 146 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 MGLLQ99685 303 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 SLC30A2Q9BRI3 323 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 FZR1Q9UM11 496 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 ZNF281Q9Y2X9 895 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 MPC1Q9Y5U8 109 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 V9GYS6 101 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 LRBAP50851 2863 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
CCM2-215ENST00000482714 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
CCM2-215ENST00000482714 ANKRD30BLA7E2S9 258 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 H7C417 338 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 P2RY10O00398 339 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 GMDSO60547 372 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 CST4P01036 141 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 RAF1P04049 648 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 ERCC1P07992 297 aaPredicted RBP13.1□□□□□ -0.31
CCM2-215ENST00000482714 PAX1P15863 534 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 PCMT1P22061 227 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 TRAM1Q15629 374 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 PCGF3Q3KNV8 242 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 YIF1BQ5BJH7 314 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 COMMD2Q86X83 199 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 GHSRQ92847 366 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 DCHS2Q6V1P9 2916 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 MAGEA13PA6NCF6 341 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 SERPINA3P01011 423 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 CPEP16870 476 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 CELP19835 753 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 ZNF81P51508 661 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 CDH15P55291 814 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 GFOD2Q3B7J2 385 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 GPR148Q8TDV2 347 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 NEU4Q8WWR8 484 aaPredicted RBP13.1□□□□□ -0.31
CCM2-215ENST00000482714 TRMT61AQ96FX7 289 aaKnown RBP13.1□□□□□ -0.31
CCM2-215ENST00000482714 CCL19Q99731 98 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 ENPP5Q9UJA9 477 aa13.1□□□□□ -0.31
CCM2-215ENST00000482714 SIRT4Q9Y6E7 314 aaPredicted RBP13.1□□□□□ -0.31
CCM2-215ENST00000482714 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 ANOS1P23352 680 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 TNFSF4P23510 183 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 DNASE1P24855 282 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 PSMA1P25786 263 aaKnown RBP13.09□□□□□ -0.31
CCM2-215ENST00000482714 MAP2K4P45985 399 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 TNK1Q13470 666 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
CCM2-215ENST00000482714 XAF1Q6GPH4 301 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 RDH10Q8IZV5 341 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 OR56B2PQ8NGI1 322 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 UFD1Q92890 307 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 MBD6Q96DN6 1003 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 FAM71F1Q96KD3 344 aaPredicted RBP13.09□□□□□ -0.31
CCM2-215ENST00000482714 TECTBQ96PL2 329 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 PDCD1LG2Q9BQ51 273 aa13.09□□□□□ -0.31
CCM2-215ENST00000482714 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
CCM2-215ENST00000482714 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
CCM2-215ENST00000482714 MYEF2Q9P2K5 600 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms