RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 FUNDC2Q9BWH2 189 aa9.64□□□□□ -0.87
SREBF1-209ENST00000470247 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF275Q9NSD4 429 aaPredicted RBP9.64□□□□□ -0.87
SREBF1-209ENST00000470247 MYEF2Q9P2K5 600 aaKnown RBP9.64□□□□□ -0.87
SREBF1-209ENST00000470247 FZR1Q9UM11 496 aa9.64□□□□□ -0.87
SREBF1-209ENST00000470247 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
SREBF1-209ENST00000470247 A6NIN4 97 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 DHRS7CA6NNS2 312 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 GABRPO00591 440 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 GOSR1O95249 250 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 IGHV3-13P01766 116 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 HLA-DPB1P04440 258 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 CFL1P23528 166 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 SOX2P48431 317 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 Q499Y3 187 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 ZMAT1Q5H9K5 638 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 FAM27D1Q5T7N8 215 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 TMEM42Q69YG0 159 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 UNQ6126/PRO20091Q6UXV3 157 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 MRPL21Q7Z2W9 205 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 GPR141Q7Z602 305 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 PARP16Q8N5Y8 322 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 CCDC54Q8NEL0 328 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 SYNPRQ8TBG9 265 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 RPL3LQ92901 407 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 ITFG2Q969R8 447 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 MRPL24Q96A35 216 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 FGGYQ96C11 551 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 DERL3Q96Q80 235 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 OR14A2Q96R54 314 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 MRPL37Q9BZE1 423 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 OPA3Q9H6K4 179 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 PURGQ9UJV8 347 aaKnown RBP9.63□□□□□ -0.87
SREBF1-209ENST00000470247 STUB1Q9UNE7 303 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 CMAHPQ9Y471 501 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 CEPT1Q9Y6K0 416 aa9.63□□□□□ -0.87
SREBF1-209ENST00000470247 A0A1B0GWJ7 208 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 A0A1W2PPK0 400 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 SHISA3A0PJX4 238 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 ANKRD61A6NGH8 418 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 MTRF1O75570 445 aaKnown RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 CTAG2O75638 210 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RGS9O75916 674 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 UCHL1P09936 223 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 OR4A8P0C604 315 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 OCM2P0CE71 109 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 FAHP16930 419 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 GALP22466 123 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 PSMA1P25786 263 aaKnown RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 FGF9P31371 208 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 TTKP33981 857 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 DDOSTP39656 456 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 MAP2K3P46734 347 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RPS23P62266 143 aaKnown RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RIPPLY1Q0D2K3 151 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 TRAM1Q15629 374 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 CTF1Q16619 201 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 ZBTB37Q5TC79 503 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 GPR107Q5VW38 600 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF529Q6P280 563 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 Q6ZR03 302 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 CEACAM19Q7Z692 300 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 COMMD2Q86X83 199 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 SEMA6DQ8NFY4 1073 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 TMEM106AQ96A25 262 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 DHRS9Q9BPW9 319 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 CENPOQ9BU64 300 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 FGF23Q9GZV9 251 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RNF167Q9H6Y7 350 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 ENPP5Q9UJA9 477 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 POU2F3Q9UKI9 436 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 PIGLQ9Y2B2 252 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 RHBDD3Q9Y3P4 386 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
SREBF1-209ENST00000470247 IGKV1-9A0A0C4DH69 117 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 GGT3PA6NGU5 568 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 GATBO75879 557 aaKnown RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 GABARAPO95166 117 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 SERPINA3P01011 423 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 CST4P01036 141 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 RAF1P04049 648 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 COX6B1P14854 86 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 ZNF12P17014 697 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 IGFBP3P17936 291 aaPredicted RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 GCH1P30793 250 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 APOBEC3AP31941 199 aaPredicted RBP9.61□□□□□ -0.87
SREBF1-209ENST00000470247 SERPINF1P36955 418 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 MMP15P51511 669 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 EFNB3Q15768 340 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 SWI5Q1ZZU3 235 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 OR5AS1Q8N127 324 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 OR13C3Q8NGS6 347 aa9.61□□□□□ -0.87
SREBF1-209ENST00000470247 UBASH3BQ8TF42 649 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms