RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 KIR3DL2P43630 455 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 DAP3P51398 398 aaKnown RBP9.98□□□□□ -0.81
DDR1-240ENST00000454612 RPS4XP62701 263 aaKnown RBP9.98□□□□□ -0.81
DDR1-240ENST00000454612 STPG2Q8N412 459 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 BPIFCQ8NFQ6 507 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 OR1N1Q8NGS0 311 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 TMEM59Q9BXS4 323 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ULBP2Q9BZM5 246 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 FAM86C1Q9NVL1 165 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 TAS2R5Q9NYW4 299 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 GPR160Q9UJ42 338 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 HIF3AQ9Y2N7 669 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 SIT1Q9Y3P8 196 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 MRPS18BQ9Y676 258 aaKnown RBP9.98□□□□□ -0.81
DDR1-240ENST00000454612 ABCA1O95477 2261 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ATG2AQ2TAZ0 1938 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 NAP1L6A6NFF2 107 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 TP53I11O14683 189 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ASCL1P50553 236 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 FUT7Q11130 342 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 MFAP5Q13361 173 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 PHLDA2Q53GA4 152 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ZNF565Q8N9K5 539 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ELP5Q8TE02 316 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 ZFP57Q9NU63 452 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 PISDQ9UG56 409 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 AUP1Q9Y679 476 aa9.98□□□□□ -0.81
DDR1-240ENST00000454612 A0A096LPE4 126 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 A0A1W2PPZ6 126 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PRAF2O60831 178 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PTAFRP25105 342 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 RBMXP38159 391 aaKnown RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 GABREP78334 506 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 DMWDQ09019 674 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 KLF9Q13886 244 aaPredicted RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 SP6Q3SY56 376 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 LINC01590Q5TEZ4 76 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 SLC38A9Q8NBW4 561 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 OR4D6Q8NGJ1 314 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 C15orf40Q8WUR7 153 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ROBO4Q8WZ75 1007 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZNF764Q96H86 408 aaPredicted RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 ALKBH3Q96Q83 286 aaPredicted RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 SPOCK3Q9BQ16 436 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 NICN1Q9BSH3 213 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 CNTD2Q9H8S5 307 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PRR14LQ5THK1 2151 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 IGKV1D-43A0A0B4J1Z2 117 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 GAAP10253 952 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 CCL4P13236 92 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 TUBG1P23258 451 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 RAB5CP51148 216 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ACY1Q03154 408 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 RSU1Q15404 277 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 MCEMP1Q8IX19 187 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PPP1R1CQ8WVI7 109 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 SCMH1Q96GD3 660 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PHB2Q99623 299 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 PIEZO2Q9H5I5 2752 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 XRCC3O43542 346 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZNF354AO60765 605 aaPredicted RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 CRYBA1P05813 215 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 KLK2P20151 261 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 NME2P22392 152 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 MTCP1P56278 107 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZNF121P58317 390 aaPredicted RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 RPS11P62280 158 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDR1-240ENST00000454612 PLGLB1Q02325 96 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 RIN1Q13671 783 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 SNTB1Q13884 538 aaKnown RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 ETFRF1Q6IPR1 90 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZC3HAV1LQ96H79 300 aaKnown RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 SHDQ96IW2 340 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 URM1Q9BTM9 101 aaKnown RBP9.97□□□□□ -0.81
DDR1-240ENST00000454612 PBOV1Q9GZY1 135 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 OCIAD1Q9NX40 245 aa9.97□□□□□ -0.81
DDR1-240ENST00000454612 A0A1B0GV90 55 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 OR5H14A6NHG9 310 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 PHYHO14832 338 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 SPRY1O43609 319 aaPredicted RBP9.96□□□□□ -0.81
DDR1-240ENST00000454612 ADAP1O75689 374 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 IFNA10P01566 189 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 CCL2P13500 99 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 NKX6-1P78426 367 aaPredicted RBP9.96□□□□□ -0.81
DDR1-240ENST00000454612 KIAA0141Q14154 515 aaPredicted RBP9.96□□□□□ -0.81
DDR1-240ENST00000454612 RHEBQ15382 184 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 RNLSQ5VYX0 342 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 SYT13Q7L8C5 426 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 CPEB2Q7Z5Q1 589 aaKnown RBP9.96□□□□□ -0.81
DDR1-240ENST00000454612 BVESQ8NE79 360 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 GHRLQ9UBU3 117 aa9.96□□□□□ -0.81
DDR1-240ENST00000454612 GDF2Q9UK05 429 aaPredicted RBP9.96□□□□□ -0.81
DDR1-240ENST00000454612 MEGF11A6BM72 1044 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms