RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SLC25A35Q3KQZ1 300 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 C3orf36Q3SXR2 165 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 STAC2Q6ZMT1 411 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 COLCA1Q6ZS62 124 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 LINC00299Q6ZSB3 139 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 FAM57BQ71RH2 274 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 LIX1LQ8IVB5 337 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 ZNF584Q8IVC4 421 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 CROCCP3Q8IVE0 287 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 PLPP7Q8NBV4 271 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 RELL2Q8NC24 303 aaPredicted RBP10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 STEAP2Q8NFT2 490 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 OR1J2Q8NGS2 313 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 OR13C5Q8NGS8 318 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 PPP1R14AQ96A00 147 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 POM121L2Q96KW2 1035 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 KCNS3Q9BQ31 491 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 C1QTNF5Q9BXJ0 243 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 NOX4Q9NPH5 578 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 BRD7Q9NPI1 651 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 CRIM1Q9NZV1 1036 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 CRNNQ9UBG3 495 aaPredicted RBP10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 EDARQ9UNE0 448 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 DHDHQ9UQ10 334 aa10.15□□□□□ -0.78
AC009404.1-202ENST00000439955 HRNRQ86YZ3 2850 aaPredicted RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 LOC100509620A0A075B734 347 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 A0A1B0GTI1 187 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 ANKRD61A6NGH8 418 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 EEF1E1-BLOC1S5C9J1V9 151 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 P2RY10O00398 339 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 PDCD5O14737 125 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 CASKO14936 926 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 PIN1P1O15428 100 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 EEF1E1O43324 174 aaKnown RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 XRCC2O43543 280 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 CDRT1O95170 752 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLC2A1P11166 492 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 CFL1P23528 166 aaKnown RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 RPS19P39019 145 aaKnown RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 HGFACQ04756 655 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 TBC1D28Q2M2D7 210 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 LUZP2Q86TE4 346 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 RDH10Q8IZV5 341 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 CIARTQ8N365 385 aaPredicted RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLC30A7Q8NEW0 376 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 OR13C3Q8NGS6 347 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 OR10AC1Q8NH08 325 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 OR51E1Q8TCB6 317 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLC7A6Q92536 515 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 TMEM106AQ96A25 262 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLC25A46Q96AG3 418 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 APOBEC3DQ96AK3 386 aaPredicted RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 C10orf35Q96D05 121 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLIRPQ9GZT3 109 aaKnown RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 NXF2Q9GZY0 626 aaKnown RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLITRK2Q9H156 845 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 OPA3Q9H6K4 179 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF275Q9NSD4 429 aaPredicted RBP10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SNTG1Q9NSN8 517 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 FOXJ3Q9UPW0 622 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 SLC25A15Q9Y619 301 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 AKAP6Q13023 2319 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 COL6A5A8TX70 2615 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
AC009404.1-202ENST00000439955 A6NNC1 897 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 MTRF1O75570 445 aaKnown RBP10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 DHRS3O75911 302 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 CLPXO76031 633 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 LCATP04180 440 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 SRMP19623 302 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 SOX2P48431 317 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 ASCL1P50553 236 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 RORCP51449 518 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 ODF4Q2M2E3 257 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 SNAI3Q3KNW1 292 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 FBXL19-AS1Q494R0 122 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 FAM27D1Q5T7N8 215 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 PARP16Q8N5Y8 322 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 OR51A4Q8NGJ6 313 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 AKAP1Q92667 903 aaKnown RBP eCLIP10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 PPIL3Q9H2H8 161 aaKnown RBP10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 TCF7L1Q9HCS4 588 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 GPR84Q9NQS5 396 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 TBCCD1Q9NVR7 557 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF319Q9P2F9 582 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 CKLFQ9UBR5 152 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 V9GYS6 101 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
AC009404.1-202ENST00000439955 A0A075B6Q4 140 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 SHISA3A0PJX4 238 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 C5orf49A4QMS7 147 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 TBX1O43435 398 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 IGFBP3P17936 291 aaPredicted RBP10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 RAB3BP20337 219 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 TUBG1P23258 451 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms