RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 CASTOR1Q8WTX7 329 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 CMTM3Q96MX0 182 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 MRPL13Q9BYD1 178 aaKnown RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 STRADBQ9C0K7 418 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 HPF1Q9NWY4 346 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 B3GALT5Q9Y2C3 310 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 ONECUT2O95948 504 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 IGHV3-9P01782 118 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 RRASP10301 218 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 SFTPCP11686 197 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 OPCMLQ14982 345 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 CLLU1Q5K131 121 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 AWAT2Q6E213 333 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 FDX2Q6P4F2 183 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 C6orf15Q6UXA7 325 aaPredicted RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 C1QL2Q7Z5L3 287 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 BPIFB2Q8N4F0 458 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 BOLLQ8N9W6 283 aaKnown RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 OR2AJ1Q8NGZ0 328 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 COQ8AQ8NI60 647 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 GPX8Q8TED1 209 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 LINC00052Q96N35 136 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 ZNF416Q9BWM5 594 aa8.36□□□□□ -1.07
CUX1-206ENST00000437600 MS4A7Q9GZW8 240 aaPredicted RBP8.36□□□□□ -1.07
CUX1-206ENST00000437600 A6NIZ1 184 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR6C65A6NJZ3 312 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF736B4DX44 427 aaPredicted RBP8.35□□□□□ -1.07
CUX1-206ENST00000437600 L7N2F9 121 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 RAB27BO00194 218 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 SIGLEC5O15389 551 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 SOCS1O15524 211 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TRAF3IP2O43734 574 aaPredicted RBP8.35□□□□□ -1.07
CUX1-206ENST00000437600 DKK1O94907 266 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 MPIG6BO95866 241 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 CYB5AP00167 134 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PMP2P02689 132 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PGA4P0DJD7 388 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PGA3P0DJD8 388 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF17P17021 662 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 AKR1C4P17516 323 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR3A4PP47883 348 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 SSR4P51571 173 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 P2RY4P51582 365 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 RAP1BP61224 184 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 RAP1AP62834 184 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 CDCP2Q5VXM1 449 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 FJX1Q86VR8 437 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF283Q8N7M2 679 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR6N1Q8NGY5 312 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TMEM41AQ96HV5 264 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ARL6Q9H0F7 186 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 P4HTMQ9NXG6 502 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 NAP1L6A6NFF2 107 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TP53I11O14683 189 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TNFSF11O14788 317 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 BDKRB2P30411 391 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 NTF4P34130 210 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF93P35789 620 aaPredicted RBP8.35□□□□□ -1.07
CUX1-206ENST00000437600 RAG2P55895 527 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 GABREP78334 506 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ATP1A1-AS1Q5TC04 95 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR8B12Q8NGG6 310 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OIT3Q8WWZ8 545 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 MRGPRX4Q96LA9 322 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 DMRTA2Q96SC8 542 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 GPER1Q99527 375 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF700Q9H0M5 742 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ELL3Q9HB65 397 aaPredicted RBP8.35□□□□□ -1.07
CUX1-206ENST00000437600 PROK2Q9HC23 129 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ALKBH4Q9NXW9 302 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PLEKHA6Q9Y2H5 1048 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 KCNK7Q9Y2U2 307 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PCSK5Q92824 1860 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 A0A1B0GTI1 187 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 IGHG1P01857 330 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 CSF1P09603 554 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR4E1P0C645 316 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 HRH1P35367 487 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 DLSTP36957 453 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 MMP16P51512 607 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 CHAF1BQ13112 559 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 BAMBIQ13145 260 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ELFN2Q5R3F8 820 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 DNM1P34Q6PK57 102 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 GLIPR1L1Q6UWM5 242 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 SEZ6L2Q6UXD5 910 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 TRAPPC6BQ86SZ2 158 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 ZNF454Q8N9F8 522 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR2AK2Q8NG84 335 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 OR1M1Q8NGA1 313 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PRRX2Q99811 253 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 GPN1Q9HCN4 374 aaPredicted RBP8.35□□□□□ -1.07
CUX1-206ENST00000437600 IL17BQ9UHF5 180 aa8.35□□□□□ -1.07
CUX1-206ENST00000437600 PLSCR5A0PG75 271 aa8.34□□□□□ -1.07
CUX1-206ENST00000437600 UBE2QL1A1L167 161 aa8.34□□□□□ -1.07
CUX1-206ENST00000437600 LGALS8O00214 317 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms