RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 KALRNO60229 2985 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 ARPC4-TTLL3A0A0A6YYG9 625 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 hCG_38984A0A1B0GV85 526 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 HOXD4P09016 255 aaPredicted RBP14.69□□□□□ -0.06
CALD1-204ENST00000417172 EFNB2P52799 333 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 FAM3AP98173 230 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 UBE2V2Q15819 145 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 RAB11BQ15907 218 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 GLT8D1Q68CQ7 371 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 Q6ZSR3 168 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 BEND4Q6ZU67 534 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 CMTM4Q8IZR5 234 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 ZFP3Q96NJ6 502 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 SFXN3Q9BWM7 321 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 CNTD2Q9H8S5 307 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 TMEM138Q9NPI0 162 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 STARD10Q9Y365 291 aa14.69□□□□□ -0.06
CALD1-204ENST00000417172 EEF1E1-BLOC1S5C9J1V9 151 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 EEF1E1O43324 174 aaKnown RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 POU3F4P49335 361 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 GSK3AP49840 483 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 PSMD7P51665 324 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 PYDC2Q56P42 97 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 UBE2NLQ5JXB2 153 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 STEAP3Q658P3 488 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 RFPL4BQ6ZWI9 263 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 BHLHA15Q7RTS1 189 aaPredicted RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 LIX1LQ8IVB5 337 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 SEMA6DQ8NFY4 1073 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 PTTG3PQ9NZH4 202 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 CRIM1Q9NZV1 1036 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 ADAM30Q9UKF2 790 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 MTRF1O75570 445 aaKnown RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 ZNF12P17014 697 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 HTR2CP28335 458 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 GK2Q14410 553 aaPredicted RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 EIF2S3LQ2VIR3 472 aaKnown RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 DPPA2Q7Z7J5 298 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 BIVMQ86UB2 503 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 OR8H2Q8N162 312 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 C1orf162Q8NEQ5 155 aaPredicted RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 SYNPRQ8TBG9 265 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 RFT1Q96AA3 541 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 FAM3DQ96BQ1 224 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 PALMDQ9NP74 551 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 GPR173Q9NS66 373 aa14.68□□□□□ -0.06
CALD1-204ENST00000417172 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
CALD1-204ENST00000417172 LOC390937A0A1W2PQ73 354 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 APOA1P02647 267 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 HCKP08631 526 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 CALCBP10092 127 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 CD37P11049 281 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 CFPP27918 469 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 HOXC12P31275 282 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 THBS4P35443 961 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 P2RY6Q15077 328 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 C2orf76Q3KRA6 126 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 SPATA46Q5T0L3 261 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 OR10K2Q6IF99 312 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 ALKBH2Q6NS38 261 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 CRIP3Q6Q6R5 217 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 PGAP1Q75T13 922 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 LYSMD2Q8IV50 215 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 NKAIN3Q8N8D7 197 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 PIGTQ969N2 578 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 APOBEC3DQ96AK3 386 aaPredicted RBP14.67□□□□□ -0.06
CALD1-204ENST00000417172 GAL3ST1Q99999 423 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 CHST5Q9GZS9 411 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 POLEQ07864 2286 aa14.67□□□□□ -0.06
CALD1-204ENST00000417172 MEGF11A6BM72 1044 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 TMEM8BA6NDV4 472 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 XRCC2O43543 280 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 FAM157BP0CG42 384 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 XKRXQ6PP77 449 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 RELL2Q8NC24 303 aaPredicted RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 OR6M1Q8NGM8 313 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 SPSB4Q96A44 273 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 S100PBPQ96BU1 408 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 CCDC120Q96HB5 630 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 ABHD1Q96SE0 405 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 SP140LQ9H930 580 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 TMEM272A0A1B0GTI8 110 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 ZNF93P35789 620 aaPredicted RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 OR3A4PP47883 348 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 ERVS71-1P61550 626 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 RBPJQ06330 500 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 FAM27E3Q08E93 113 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 OR8B8Q15620 311 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 TBC1D28Q2M2D7 210 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 RNASE12Q5GAN4 147 aaKnown RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 C1orf100Q5SVJ3 147 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 OR5D18Q8NGL1 313 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 AKAP1Q92667 903 aaKnown RBP eCLIP14.66□□□□□ -0.06
CALD1-204ENST00000417172 GCDHQ92947 438 aaPredicted RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 BOD1Q96IK1 185 aa14.66□□□□□ -0.06
CALD1-204ENST00000417172 METTL17Q9H7H0 456 aaPredicted RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
CALD1-204ENST00000417172 ADGRG4Q8IZF6 3080 aa14.65□□□□□ -0.06
CALD1-204ENST00000417172 TRGV8A0A0C4DH27 118 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms