RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TAF13Q15543 124 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 C1orf189Q5VU69 101 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 FBXW12Q6X9E4 464 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 KCTD9Q7L273 389 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 GALNT16Q8N428 558 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 AQP3Q92482 292 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 SLC25A36Q96CQ1 311 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 PROK2Q9HC23 129 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 N6AMT1Q9Y5N5 214 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 C9orf172C9J069 976 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 EFNA2O43921 213 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 SELEP16581 610 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 MPGP29372 298 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 TNFSF10P50591 281 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 TMEM211Q6ICI0 200 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 GGNQ86UU5 652 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 COMMD9Q9P000 198 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 COA3Q9Y2R0 106 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-206ENST00000397617 MFNGO00587 321 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 FSTL3O95633 263 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 H2AFB2P0C5Z0 115 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 CLEC2LP0C7M8 214 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 GTF2F2P13984 249 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 PTGER1P34995 402 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 ATP1B3P54709 279 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 FAM76BQ5HYJ3 339 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 INO80CQ6PI98 192 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-206ENST00000397617 SLC25A28Q96A46 364 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 RNF31Q96EP0 1072 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 REPIN1Q9BWE0 567 aaKnown RBP5.17□□□□□ -1.58
PTPRD-206ENST00000397617 PBOV1Q9GZY1 135 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 FAM86C1Q9NVL1 165 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 OCIAD1Q9NX40 245 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 TUBD1Q9UJT1 453 aa5.17□□□□□ -1.58
PTPRD-206ENST00000397617 A0A1B0GWJ7 208 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SMAD9O15198 467 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SELENOFO60613 162 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 HPGDSO60760 199 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SS18L1O75177 396 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 HLA-DQA2P01906 255 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ADH4P08319 380 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ENDOGQ14249 297 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ZNF57Q68EA5 555 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 CHST4Q8NCG5 386 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 CT55Q8WUE5 264 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 MITD1Q8WV92 249 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ST8SIA4Q92187 359 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ORAI1Q96D31 301 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SEH1LQ96EE3 360 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 RTN4RQ9BZR6 473 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 GLS2Q9UI32 602 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 CENPEQ02224 2701 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 IFNA7P01567 189 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ITGA5P08648 1049 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 CCL4P13236 92 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 QRFPP83859 136 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 MXD1Q05195 221 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ARSKQ6UWY0 536 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 Q6ZTK2 550 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 FCRLAQ7L513 359 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 BTLAQ7Z6A9 289 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 CMTM4Q8IZR5 234 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 OR51T1Q8NGJ9 327 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 DNAJB11Q9UBS4 358 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SLC7A11Q9UPY5 501 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 DUS4LO95620 317 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 C1QL3Q5VWW1 255 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ZNF584Q8IVC4 421 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 MED20Q9H944 212 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 NLKQ9UBE8 527 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 V9GYS6 101 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 HELZ2Q9BYK8 2649 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SCGB2A1O75556 95 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 COX5AP20674 150 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 LY6G6FQ5SQ64 297 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 RAET1LQ5VY80 246 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 TIPARPQ7Z3E1 657 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 GALNTL5Q7Z4T8 443 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 GAPTQ8N292 157 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 EIF4E3Q8N5X7 224 aaKnown RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 OR10S1Q8NGN2 331 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SLAMF9Q96A28 289 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 POLDIP2Q9Y2S7 368 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 GYPBP06028 91 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 MMP7P09237 267 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SSX2Q16385 188 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ACSF3Q4G176 576 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 KRTCAP3Q53RY4 240 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 PLXDC2Q6UX71 529 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 RPTNQ6XPR3 784 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 LHFPL1Q86WI0 220 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ZIC4Q8N9L1 334 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 OR5A2Q8NGI9 324 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 ZNF431Q8TF32 576 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-206ENST00000397617 APH1AQ96BI3 265 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 SPOCK3Q9BQ16 436 aa5.16□□□□□ -1.58
PTPRD-206ENST00000397617 POFUT1Q9H488 388 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms