RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FAM27E3Q08E93 113 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 GFOD2Q3B7J2 385 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 TIMM23BQ5SRD1 257 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 PRSS57Q6UWY2 283 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 NAA40Q86UY6 237 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 WDR31Q8NA23 367 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 OR51E1Q8TCB6 317 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
SEC13-209ENST00000397117 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 USB1Q9BQ65 265 aaKnown RBP11.45□□□□□ -0.58
SEC13-209ENST00000397117 ACTR6Q9GZN1 396 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 DCSTAMPQ9H295 470 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 DHDHQ9UQ10 334 aa11.45□□□□□ -0.58
SEC13-209ENST00000397117 ROS1P08922 2347 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 C16orf97H3BN30 126 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 SYT7O43581 403 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 SC5DO75845 299 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 CCL2P13500 99 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 UGT2B10P36537 528 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 SOX2P48431 317 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 IDH3GP51553 393 aaPredicted RBP11.44□□□□□ -0.58
SEC13-209ENST00000397117 PRSS45Q7RTY3 260 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 ZNF584Q8IVC4 421 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 OR51A4Q8NGJ6 313 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 OR1J2Q8NGS2 313 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 OR13C3Q8NGS6 347 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 DCUN1D5Q9BTE7 237 aa11.44□□□□□ -0.58
SEC13-209ENST00000397117 RAI1Q7Z5J4 1906 aaPredicted RBP11.44□□□□□ -0.58
SEC13-209ENST00000397117 FBN1P35555 2871 aaKnown RBP11.44□□□□□ -0.58
SEC13-209ENST00000397117 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 TRBV5-5A0A0J9YX44 114 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 A0A0U1RQV5 110 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 A0A1W2PPK0 400 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 CASKO14936 926 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 SMPD2O60906 423 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 CD2P06729 351 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 ZNF14P17017 642 aaPredicted RBP11.43□□□□□ -0.58
SEC13-209ENST00000397117 ZNF182P17025 639 aaPredicted RBP11.43□□□□□ -0.58
SEC13-209ENST00000397117 MYL9P24844 172 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 HSD17B12Q53GQ0 312 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 C1QTNF12Q5T7M4 302 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 OR10AC1Q8NH08 325 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 PIGTQ969N2 578 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 TMEM106AQ96A25 262 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 POM121L2Q96KW2 1035 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 Q96MF0 132 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 KCNS3Q9BQ31 491 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 C1QTNF6Q9BXI9 259 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 NOX4Q9NPH5 578 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 GPR84Q9NQS5 396 aa11.43□□□□□ -0.58
SEC13-209ENST00000397117 SIAH2O43255 324 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 CDRT1O95170 752 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 UCHL1P09936 223 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 ZNF12P17014 697 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 MAGEB1P43366 347 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 HGFACQ04756 655 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 PPA1Q15181 289 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 SNAI3Q3KNW1 292 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 FAM27D1Q5T7N8 215 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 UNQ9370/PRO34162Q6UXP9 181 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 DOK3Q7L591 496 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 FAM169BQ8N8A8 192 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 APOBEC3DQ96AK3 386 aaPredicted RBP11.42□□□□□ -0.58
SEC13-209ENST00000397117 FAM71F1Q96KD3 344 aaPredicted RBP11.42□□□□□ -0.58
SEC13-209ENST00000397117 ZNF75AQ96N20 296 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 DERL3Q96Q80 235 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 CDH20Q9HBT6 801 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 ZNF319Q9P2F9 582 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 EIF3KQ9UBQ5 218 aaKnown RBP11.42□□□□□ -0.58
SEC13-209ENST00000397117 NDRG3Q9UGV2 375 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 SLC25A15Q9Y619 301 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
SEC13-209ENST00000397117 IL1AP01583 271 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 CELA3BP08861 270 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 SDC2P34741 201 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 MXD1Q05195 221 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 MALLQ13021 153 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 REEP6Q96HR9 211 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 PPIL3Q9H2H8 161 aaKnown RBP11.42□□□□□ -0.58
SEC13-209ENST00000397117 RGCCQ9H4X1 137 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 SNTG1Q9NSN8 517 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 CKLFQ9UBR5 152 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
SEC13-209ENST00000397117 A0A1B0GTI1 187 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 SMAD7O15105 426 aaKnown RBP11.41□□□□□ -0.58
SEC13-209ENST00000397117 XRCC2O43543 280 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 ZNF20P17024 532 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 SRMP19623 302 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms