RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CTAG2O75638 210 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 OR2A4O95047 310 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 H2BFMP0C1H6 154 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 CRABP1P29762 137 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 GNALP38405 381 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 MAGEA5P43359 124 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ATP1B3P54709 279 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 RAG2P55895 527 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 GABREP78334 506 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 LRRTM1Q86UE6 522 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 GVQW1Q8N7I0 195 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 FADS6Q8N9I5 356 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 OR10H5Q8NGA6 315 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 NPRL2Q8WTW4 380 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 SLC25A44Q96H78 314 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 OR2A7Q96R45 310 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 COMMD4Q9H0A8 199 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 SLITRK2Q9H156 845 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 VSX1Q9NZR4 365 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 NBASA2RRP1 2371 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ARPC4-TTLL3A0A0A6YYG9 625 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 NPIPA2E9PIF3 369 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 NPIPA3F8WFD2 350 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 CTDSPLO15194 276 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 CBR3O75828 277 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 DBHP09172 617 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 VAMP1P23763 118 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 MSX1P28360 303 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 RIDAP52758 137 aaKnown RBP6.71□□□□□ -1.33
TRIM55-202ENST00000315962 CAPZA1P52907 286 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 C2orf76Q3KRA6 126 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 LY6G6FQ5SQ64 297 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 ABHD17BQ5VST6 288 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OLFML2AQ68BL7 652 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 ASPHD2Q6ICH7 369 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OVCH2Q7RTZ1 564 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 HDDC2Q7Z4H3 204 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 GALNTL5Q7Z4T8 443 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM200AQ86VY9 491 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 SLC43A2Q8N370 569 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 SPICQ8N5J4 248 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 JAGN1Q8N5M9 183 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 TEX19Q8NA77 164 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 PXT1Q8NFP0 134 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OR10S1Q8NGN2 331 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OR5M9Q8NGP3 310 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OR1S2Q8NGQ3 325 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 OR52N5Q8NH56 324 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 C4orf45Q96LM5 186 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 DCBLD2Q96PD2 775 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 PCDHB16Q9NRJ7 776 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 TAS2R4Q9NYW5 299 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF319Q9P2F9 582 aa6.71□□□□□ -1.33
TRIM55-202ENST00000315962 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 E9PLN8 166 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 STMND1H3BQB6 276 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 GALR2O43603 387 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 NEURL1O76050 574 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 IGHG1P01857 330 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 HLA-AP01891 365 aaKnown RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 OR4E1P0C645 316 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 FTH1P19P0C7X4 201 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF883P0CG24 379 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 PGA4P0DJD7 388 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 PGA3P0DJD8 388 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 PI3P19957 117 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 AKR1C3P42330 323 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 SLC6A9P48067 706 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 SUMO3P55854 103 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 DSCR4P56555 118 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 CLDN15P56746 228 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 CARD18P57730 90 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 ELFN2Q5R3F8 820 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 STEAP1BQ6NZ63 245 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 UNQ9370/PRO34162Q6UXP9 181 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 BHLHE23Q8NDY6 225 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 OR51E1Q8TCB6 317 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 ST7LQ8TDW4 575 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 SLAMF6Q96DU3 332 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 VRK1Q99986 396 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 MRPL13Q9BYD1 178 aaKnown RBP6.71□□□□□ -1.34
TRIM55-202ENST00000315962 SPRY4Q9C004 299 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 LDAHQ9H6V9 325 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 PLEKHA1Q9HB21 404 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 LHFPL6Q9Y693 200 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 TMEM14AQ9Y6G1 99 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 SPTA1P02549 2419 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 CHD8Q9HCK8 2581 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 IGF2RP11717 2491 aa6.71□□□□□ -1.34
TRIM55-202ENST00000315962 TMEM82A0PJX8 343 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 LRRC3CA6NJW4 275 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 KRBOX1C9JBD0 128 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 H7C417 338 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 AGPAT2O15120 278 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 RAB3DO95716 219 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 HPP00738 406 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 SERPINA7P05543 415 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 CPN1P15169 458 aa6.7□□□□□ -1.34
TRIM55-202ENST00000315962 CBR1P16152 277 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms